Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
VBP1P61758 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.54□□□□□ -0.24
VBP1P61758 AC092119.3-201ENST00000612618 583 ntBASIC13.54□□□□□ -0.24
VBP1P61758 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
VBP1P61758 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.54□□□□□ -0.24
VBP1P61758 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.54□□□□□ -0.24
VBP1P61758 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
VBP1P61758 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VBP1P61758 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VBP1P61758 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
VBP1P61758 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
VBP1P61758 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VBP1P61758 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VBP1P61758 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VBP1P61758 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VBP1P61758 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VBP1P61758 MEX3B-202ENST00000558133 4333 ntBASIC13.53□□□□□ -0.24
VBP1P61758 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VBP1P61758 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VBP1P61758 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.53□□□□□ -0.24
VBP1P61758 PCED1CP-201ENST00000419887 785 ntBASIC13.53□□□□□ -0.24
VBP1P61758 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
VBP1P61758 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.53□□□□□ -0.24
VBP1P61758 AL138918.1-201ENST00000568306 659 ntBASIC13.53□□□□□ -0.24
VBP1P61758 AC073389.1-201ENST00000595595 795 ntBASIC13.53□□□□□ -0.24
VBP1P61758 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VBP1P61758 AC005593.1-201ENST00000624894 515 ntBASIC13.53□□□□□ -0.24
VBP1P61758 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.53□□□□□ -0.24
VBP1P61758 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VBP1P61758 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.53□□□□□ -0.24
VBP1P61758 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VBP1P61758 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
VBP1P61758 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
VBP1P61758 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
VBP1P61758 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
VBP1P61758 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VBP1P61758 AC020910.6-201ENST00000623084 1459 ntBASIC13.53□□□□□ -0.24
VBP1P61758 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
VBP1P61758 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VBP1P61758 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VBP1P61758 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VBP1P61758 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.53□□□□□ -0.24
VBP1P61758 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
VBP1P61758 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
VBP1P61758 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VBP1P61758 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VBP1P61758 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VBP1P61758 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
VBP1P61758 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VBP1P61758 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
VBP1P61758 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VBP1P61758 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VBP1P61758 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
VBP1P61758 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
VBP1P61758 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
VBP1P61758 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.52□□□□□ -0.24
VBP1P61758 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
VBP1P61758 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.24
VBP1P61758 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VBP1P61758 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
VBP1P61758 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VBP1P61758 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
VBP1P61758 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VBP1P61758 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VBP1P61758 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VBP1P61758 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
VBP1P61758 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.52□□□□□ -0.25
VBP1P61758 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VBP1P61758 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.52□□□□□ -0.25
VBP1P61758 RNA5SP410-201ENST00000516285 106 ntBASIC13.52□□□□□ -0.25
VBP1P61758 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.52□□□□□ -0.25
VBP1P61758 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.52□□□□□ -0.25
VBP1P61758 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.52□□□□□ -0.25
VBP1P61758 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
VBP1P61758 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
VBP1P61758 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VBP1P61758 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VBP1P61758 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.52□□□□□ -0.25
VBP1P61758 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
VBP1P61758 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
VBP1P61758 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.52□□□□□ -0.25
VBP1P61758 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
VBP1P61758 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.52□□□□□ -0.25
VBP1P61758 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VBP1P61758 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.52□□□□□ -0.25
VBP1P61758 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VBP1P61758 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms