Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.22□□□□□ -0.29
DEFA3P59666 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA3P59666 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA3P59666 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
DEFA3P59666 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA3P59666 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC13.22□□□□□ -0.29
DEFA3P59666 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA3P59666 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA3P59666 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA3P59666 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA3P59666 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA3P59666 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA3P59666 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA3P59666 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.22□□□□□ -0.29
DEFA3P59666 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA3P59666 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.22□□□□□ -0.29
DEFA3P59666 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA3P59666 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.22□□□□□ -0.29
DEFA3P59666 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA3P59666 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.22□□□□□ -0.29
DEFA3P59666 MIR4515-201ENST00000584082 81 ntBASIC13.22□□□□□ -0.29
DEFA3P59666 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.22□□□□□ -0.29
DEFA3P59666 Z69720.1-201ENST00000601483 472 ntBASIC13.22□□□□□ -0.29
DEFA3P59666 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.22□□□□□ -0.29
DEFA3P59666 HYMAI.1-201ENST00000620949 238 ntBASIC13.22□□□□□ -0.29
DEFA3P59666 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.22□□□□□ -0.29
DEFA3P59666 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA3P59666 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA3P59666 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA3P59666 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
DEFA3P59666 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
DEFA3P59666 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA3P59666 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.22□□□□□ -0.29
DEFA3P59666 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.22□□□□□ -0.29
DEFA3P59666 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.22□□□□□ -0.29
DEFA3P59666 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.22□□□□□ -0.29
DEFA3P59666 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA3P59666 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA3P59666 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.22□□□□□ -0.29
DEFA3P59666 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.22□□□□□ -0.29
DEFA3P59666 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
DEFA3P59666 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA3P59666 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA3P59666 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA3P59666 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.22□□□□□ -0.29
DEFA3P59666 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA3P59666 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA3P59666 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
DEFA3P59666 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA3P59666 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
DEFA3P59666 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA3P59666 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
DEFA3P59666 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA3P59666 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA3P59666 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.21□□□□□ -0.29
DEFA3P59666 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA3P59666 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA3P59666 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA3P59666 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.21□□□□□ -0.29
DEFA3P59666 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA3P59666 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA3P59666 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA3P59666 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA3P59666 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA3P59666 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA3P59666 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA3P59666 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA3P59666 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.21□□□□□ -0.29
DEFA3P59666 MIR935-201ENST00000401179 91 ntBASIC13.21□□□□□ -0.29
DEFA3P59666 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.21□□□□□ -0.29
DEFA3P59666 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.21□□□□□ -0.29
DEFA3P59666 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.21□□□□□ -0.29
DEFA3P59666 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.21□□□□□ -0.29
DEFA3P59666 KRT8P26-201ENST00000534154 1276 ntBASIC13.21□□□□□ -0.29
DEFA3P59666 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.21□□□□□ -0.29
DEFA3P59666 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.21□□□□□ -0.29
DEFA3P59666 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.21□□□□□ -0.29
DEFA3P59666 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.21□□□□□ -0.29
DEFA3P59666 AC073439.1-201ENST00000624121 1774 ntBASIC13.21□□□□□ -0.29
DEFA3P59666 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
DEFA3P59666 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA3P59666 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA3P59666 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.21□□□□□ -0.3
DEFA3P59666 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
DEFA3P59666 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
DEFA3P59666 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
DEFA3P59666 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
DEFA3P59666 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.21□□□□□ -0.3
DEFA3P59666 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
DEFA3P59666 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
DEFA3P59666 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
DEFA3P59666 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
DEFA3P59666 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
DEFA3P59666 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
DEFA3P59666 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
DEFA3P59666 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
DEFA3P59666 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC13.2□□□□□ -0.3
DEFA3P59666 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA3P59666 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA3P59666 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms