Protein–RNA interactions for Protein: P59665

DEFA1, Neutrophil defensin 1, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA1P59665 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA1P59665 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA1P59665 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
DEFA1P59665 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA1P59665 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC13.22□□□□□ -0.29
DEFA1P59665 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA1P59665 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA1P59665 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA1P59665 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA1P59665 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA1P59665 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA1P59665 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA1P59665 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.22□□□□□ -0.29
DEFA1P59665 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA1P59665 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.22□□□□□ -0.29
DEFA1P59665 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA1P59665 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.22□□□□□ -0.29
DEFA1P59665 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA1P59665 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.22□□□□□ -0.29
DEFA1P59665 MIR4515-201ENST00000584082 81 ntBASIC13.22□□□□□ -0.29
DEFA1P59665 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.22□□□□□ -0.29
DEFA1P59665 Z69720.1-201ENST00000601483 472 ntBASIC13.22□□□□□ -0.29
DEFA1P59665 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.22□□□□□ -0.29
DEFA1P59665 HYMAI.1-201ENST00000620949 238 ntBASIC13.22□□□□□ -0.29
DEFA1P59665 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.22□□□□□ -0.29
DEFA1P59665 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA1P59665 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA1P59665 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA1P59665 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
DEFA1P59665 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
DEFA1P59665 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA1P59665 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.22□□□□□ -0.29
DEFA1P59665 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.22□□□□□ -0.29
DEFA1P59665 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.22□□□□□ -0.29
DEFA1P59665 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.22□□□□□ -0.29
DEFA1P59665 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA1P59665 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA1P59665 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.22□□□□□ -0.29
DEFA1P59665 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.22□□□□□ -0.29
DEFA1P59665 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
DEFA1P59665 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA1P59665 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA1P59665 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA1P59665 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.22□□□□□ -0.29
DEFA1P59665 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA1P59665 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA1P59665 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
DEFA1P59665 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA1P59665 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
DEFA1P59665 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA1P59665 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
DEFA1P59665 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA1P59665 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA1P59665 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.21□□□□□ -0.29
DEFA1P59665 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA1P59665 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA1P59665 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA1P59665 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.21□□□□□ -0.29
DEFA1P59665 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA1P59665 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA1P59665 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA1P59665 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA1P59665 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA1P59665 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA1P59665 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA1P59665 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA1P59665 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.21□□□□□ -0.29
DEFA1P59665 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.21□□□□□ -0.29
DEFA1P59665 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.21□□□□□ -0.29
DEFA1P59665 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.21□□□□□ -0.29
DEFA1P59665 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.21□□□□□ -0.29
DEFA1P59665 KRT8P26-201ENST00000534154 1276 ntBASIC13.21□□□□□ -0.29
DEFA1P59665 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.21□□□□□ -0.29
DEFA1P59665 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.21□□□□□ -0.29
DEFA1P59665 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.21□□□□□ -0.29
DEFA1P59665 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.21□□□□□ -0.29
DEFA1P59665 AC073439.1-201ENST00000624121 1774 ntBASIC13.21□□□□□ -0.29
DEFA1P59665 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
DEFA1P59665 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA1P59665 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA1P59665 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.21□□□□□ -0.3
DEFA1P59665 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
DEFA1P59665 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
DEFA1P59665 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
DEFA1P59665 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
DEFA1P59665 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.21□□□□□ -0.3
DEFA1P59665 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
DEFA1P59665 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
DEFA1P59665 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
DEFA1P59665 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
DEFA1P59665 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
DEFA1P59665 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
DEFA1P59665 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
DEFA1P59665 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
DEFA1P59665 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC13.2□□□□□ -0.3
DEFA1P59665 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA1P59665 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA1P59665 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA1P59665 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA1P59665 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms