Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 CEP164P1-201ENST00000455142 418 ntBASIC17.54■□□□□ 0.4
RHBDL3P58872 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.54■□□□□ 0.4
RHBDL3P58872 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17.54■□□□□ 0.4
RHBDL3P58872 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.54■□□□□ 0.4
RHBDL3P58872 AC090857.1-201ENST00000527400 390 ntBASIC17.54■□□□□ 0.4
RHBDL3P58872 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RHBDL3P58872 PRKXP1-201ENST00000561423 1122 ntBASIC17.54■□□□□ 0.4
RHBDL3P58872 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.54■□□□□ 0.4
RHBDL3P58872 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.54■□□□□ 0.4
RHBDL3P58872 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC17.54■□□□□ 0.4
RHBDL3P58872 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.54■□□□□ 0.4
RHBDL3P58872 AC128714.1-201ENST00000637035 887 ntBASIC17.54■□□□□ 0.4
RHBDL3P58872 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
RHBDL3P58872 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RHBDL3P58872 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RHBDL3P58872 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RHBDL3P58872 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RHBDL3P58872 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RHBDL3P58872 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RHBDL3P58872 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RHBDL3P58872 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.54■□□□□ 0.4
RHBDL3P58872 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RHBDL3P58872 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.54■□□□□ 0.4
RHBDL3P58872 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.54■□□□□ 0.4
RHBDL3P58872 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.53■□□□□ 0.4
RHBDL3P58872 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RHBDL3P58872 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.53■□□□□ 0.4
RHBDL3P58872 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RHBDL3P58872 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RHBDL3P58872 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RHBDL3P58872 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RHBDL3P58872 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RHBDL3P58872 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.53■□□□□ 0.4
RHBDL3P58872 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
RHBDL3P58872 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RHBDL3P58872 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC17.53■□□□□ 0.4
RHBDL3P58872 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RHBDL3P58872 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.53■□□□□ 0.4
RHBDL3P58872 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RHBDL3P58872 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.53■□□□□ 0.4
RHBDL3P58872 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RHBDL3P58872 RAN-210ENST00000541630 1475 ntTSL 2 BASIC17.53■□□□□ 0.4
RHBDL3P58872 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.53■□□□□ 0.4
RHBDL3P58872 HINT2P1-201ENST00000419438 481 ntBASIC17.53■□□□□ 0.4
RHBDL3P58872 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.53■□□□□ 0.4
RHBDL3P58872 XBP1P1-201ENST00000436573 652 ntBASIC17.53■□□□□ 0.4
RHBDL3P58872 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.53■□□□□ 0.4
RHBDL3P58872 AL353637.1-201ENST00000451571 732 ntBASIC17.53■□□□□ 0.4
RHBDL3P58872 AC234782.1-201ENST00000451950 919 ntBASIC17.53■□□□□ 0.4
RHBDL3P58872 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.53■□□□□ 0.4
RHBDL3P58872 RTN3P1-201ENST00000536295 711 ntBASIC17.53■□□□□ 0.4
RHBDL3P58872 RBM8B-201ENST00000555532 525 ntBASIC17.53■□□□□ 0.4
RHBDL3P58872 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.53■□□□□ 0.4
RHBDL3P58872 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC17.53■□□□□ 0.4
RHBDL3P58872 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.53■□□□□ 0.4
RHBDL3P58872 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.53■□□□□ 0.4
RHBDL3P58872 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.53■□□□□ 0.4
RHBDL3P58872 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC17.53■□□□□ 0.4
RHBDL3P58872 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RHBDL3P58872 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RHBDL3P58872 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RHBDL3P58872 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
RHBDL3P58872 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RHBDL3P58872 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.53■□□□□ 0.4
RHBDL3P58872 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC17.53■□□□□ 0.4
RHBDL3P58872 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RHBDL3P58872 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.53■□□□□ 0.4
RHBDL3P58872 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RHBDL3P58872 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.53■□□□□ 0.4
RHBDL3P58872 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.53■□□□□ 0.4
RHBDL3P58872 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RHBDL3P58872 AC139712.1-201ENST00000378256 1875 ntBASIC17.52■□□□□ 0.4
RHBDL3P58872 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
RHBDL3P58872 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RHBDL3P58872 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.52■□□□□ 0.4
RHBDL3P58872 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.52■□□□□ 0.4
RHBDL3P58872 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
RHBDL3P58872 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RHBDL3P58872 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RHBDL3P58872 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RHBDL3P58872 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RHBDL3P58872 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.52■□□□□ 0.4
RHBDL3P58872 UFM1-202ENST00000379649 846 ntTSL 4 BASIC17.52■□□□□ 0.4
RHBDL3P58872 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC17.52■□□□□ 0.4
RHBDL3P58872 EEF1DP6-201ENST00000449232 372 ntBASIC17.52■□□□□ 0.4
RHBDL3P58872 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RHBDL3P58872 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.52■□□□□ 0.4
RHBDL3P58872 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.52■□□□□ 0.4
RHBDL3P58872 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RHBDL3P58872 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.52■□□□□ 0.4
RHBDL3P58872 MIR4706-201ENST00000582134 82 ntBASIC17.52■□□□□ 0.4
RHBDL3P58872 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RHBDL3P58872 AC006453.1-201ENST00000636037 1257 ntBASIC17.52■□□□□ 0.4
RHBDL3P58872 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.52■□□□□ 0.4
RHBDL3P58872 AC006504.5-208ENST00000588784 2401 ntBASIC17.52■□□□□ 0.4
RHBDL3P58872 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RHBDL3P58872 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RHBDL3P58872 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RHBDL3P58872 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
RHBDL3P58872 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms