Protein–RNA interactions for Protein: P56817

BACE1, Beta-secretase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BACE1P56817 AL805961.1-201ENST00000642026 753 ntBASIC17.13■□□□□ 0.33
BACE1P56817 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
BACE1P56817 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BACE1P56817 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
BACE1P56817 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
BACE1P56817 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.13■□□□□ 0.33
BACE1P56817 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
BACE1P56817 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BACE1P56817 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BACE1P56817 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BACE1P56817 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.13■□□□□ 0.33
BACE1P56817 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BACE1P56817 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.12■□□□□ 0.33
BACE1P56817 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.12■□□□□ 0.33
BACE1P56817 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
BACE1P56817 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
BACE1P56817 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BACE1P56817 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
BACE1P56817 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BACE1P56817 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.12■□□□□ 0.33
BACE1P56817 LINC01165-201ENST00000445190 1623 ntBASIC17.12■□□□□ 0.33
BACE1P56817 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.12■□□□□ 0.33
BACE1P56817 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BACE1P56817 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BACE1P56817 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BACE1P56817 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
BACE1P56817 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC17.12■□□□□ 0.33
BACE1P56817 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17.12■□□□□ 0.33
BACE1P56817 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
BACE1P56817 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.12■□□□□ 0.33
BACE1P56817 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.12■□□□□ 0.33
BACE1P56817 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.12■□□□□ 0.33
BACE1P56817 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BACE1P56817 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
BACE1P56817 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC17.12■□□□□ 0.33
BACE1P56817 NAT9-220ENST00000582870 896 ntTSL 5 BASIC17.12■□□□□ 0.33
BACE1P56817 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC17.12■□□□□ 0.33
BACE1P56817 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BACE1P56817 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
BACE1P56817 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
BACE1P56817 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.12■□□□□ 0.33
BACE1P56817 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
BACE1P56817 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
BACE1P56817 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
BACE1P56817 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BACE1P56817 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BACE1P56817 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
BACE1P56817 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BACE1P56817 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
BACE1P56817 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.12■□□□□ 0.33
BACE1P56817 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BACE1P56817 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BACE1P56817 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BACE1P56817 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
BACE1P56817 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.12■□□□□ 0.33
BACE1P56817 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BACE1P56817 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BACE1P56817 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
BACE1P56817 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BACE1P56817 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.12■□□□□ 0.33
BACE1P56817 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BACE1P56817 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BACE1P56817 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
BACE1P56817 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BACE1P56817 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BACE1P56817 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BACE1P56817 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.11■□□□□ 0.33
BACE1P56817 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BACE1P56817 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.11■□□□□ 0.33
BACE1P56817 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BACE1P56817 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BACE1P56817 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BACE1P56817 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
BACE1P56817 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.11■□□□□ 0.33
BACE1P56817 AC015909.3-201ENST00000572855 1794 ntBASIC17.11■□□□□ 0.33
BACE1P56817 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.11■□□□□ 0.33
BACE1P56817 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.11■□□□□ 0.33
BACE1P56817 KRT18P36-201ENST00000411618 1276 ntBASIC17.11■□□□□ 0.33
BACE1P56817 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC17.11■□□□□ 0.33
BACE1P56817 RPL8P2-201ENST00000430538 502 ntBASIC17.11■□□□□ 0.33
BACE1P56817 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BACE1P56817 PHBP15-201ENST00000574228 665 ntBASIC17.11■□□□□ 0.33
BACE1P56817 MIR3677-201ENST00000578964 60 ntBASIC17.11■□□□□ 0.33
BACE1P56817 MIR3188-201ENST00000583494 85 ntBASIC17.11■□□□□ 0.33
BACE1P56817 LINC01783-202ENST00000614408 828 ntBASIC17.11■□□□□ 0.33
BACE1P56817 BX284668.2-205ENST00000619677 828 ntBASIC17.11■□□□□ 0.33
BACE1P56817 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
BACE1P56817 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BACE1P56817 LINC01101-201ENST00000622953 1884 ntBASIC17.11■□□□□ 0.33
BACE1P56817 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BACE1P56817 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BACE1P56817 CAP2P1-201ENST00000557743 1390 ntBASIC17.11■□□□□ 0.33
BACE1P56817 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.11■□□□□ 0.33
BACE1P56817 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BACE1P56817 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BACE1P56817 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.11■□□□□ 0.33
BACE1P56817 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.11■□□□□ 0.33
BACE1P56817 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.11■□□□□ 0.33
BACE1P56817 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
BACE1P56817 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms