Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.32□□□□□ -0.12
CLDN8P56748 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CLDN8P56748 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN8P56748 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN8P56748 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.32□□□□□ -0.12
CLDN8P56748 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.32□□□□□ -0.12
CLDN8P56748 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN8P56748 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CLDN8P56748 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.32□□□□□ -0.12
CLDN8P56748 AC022616.1-201ENST00000518688 554 ntBASIC14.32□□□□□ -0.12
CLDN8P56748 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.32□□□□□ -0.12
CLDN8P56748 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN8P56748 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.32□□□□□ -0.12
CLDN8P56748 SPDYE22P-201ENST00000582158 798 ntBASIC14.32□□□□□ -0.12
CLDN8P56748 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.32□□□□□ -0.12
CLDN8P56748 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN8P56748 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.32□□□□□ -0.12
CLDN8P56748 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.32□□□□□ -0.12
CLDN8P56748 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.32□□□□□ -0.12
CLDN8P56748 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.32□□□□□ -0.12
CLDN8P56748 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN8P56748 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN8P56748 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.32□□□□□ -0.12
CLDN8P56748 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CLDN8P56748 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN8P56748 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN8P56748 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN8P56748 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN8P56748 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN8P56748 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN8P56748 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN8P56748 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.32□□□□□ -0.12
CLDN8P56748 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CLDN8P56748 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.32□□□□□ -0.12
CLDN8P56748 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN8P56748 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN8P56748 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CLDN8P56748 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN8P56748 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN8P56748 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN8P56748 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN8P56748 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDN8P56748 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN8P56748 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN8P56748 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN8P56748 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN8P56748 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDN8P56748 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN8P56748 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
CLDN8P56748 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN8P56748 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CLDN8P56748 BEND3P1-201ENST00000421591 1944 ntBASIC14.31□□□□□ -0.12
CLDN8P56748 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
CLDN8P56748 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN8P56748 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CLDN8P56748 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN8P56748 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN8P56748 AC005840.4-201ENST00000541242 2494 ntBASIC14.31□□□□□ -0.12
CLDN8P56748 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN8P56748 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN8P56748 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN8P56748 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN8P56748 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN8P56748 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN8P56748 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.31□□□□□ -0.12
CLDN8P56748 AC114812.1-204ENST00000449669 728 ntBASIC14.31□□□□□ -0.12
CLDN8P56748 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.31□□□□□ -0.12
CLDN8P56748 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDN8P56748 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN8P56748 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN8P56748 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDN8P56748 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDN8P56748 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN8P56748 AC099568.2-201ENST00000609194 695 ntBASIC14.31□□□□□ -0.12
CLDN8P56748 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN8P56748 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.31□□□□□ -0.12
CLDN8P56748 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN8P56748 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN8P56748 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN8P56748 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN8P56748 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDN8P56748 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN8P56748 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN8P56748 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CLDN8P56748 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN8P56748 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN8P56748 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
CLDN8P56748 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN8P56748 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN8P56748 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN8P56748 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN8P56748 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.3□□□□□ -0.12
CLDN8P56748 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN8P56748 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN8P56748 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN8P56748 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN8P56748 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CLDN8P56748 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN8P56748 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN8P56748 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms