Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CAV3P56539 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CAV3P56539 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CAV3P56539 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
CAV3P56539 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.52□□□□□ -0.25
CAV3P56539 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CAV3P56539 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.52□□□□□ -0.25
CAV3P56539 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.52□□□□□ -0.25
CAV3P56539 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.52□□□□□ -0.25
CAV3P56539 FAM58DP-201ENST00000428076 619 ntBASIC13.52□□□□□ -0.25
CAV3P56539 EEF1DP4-201ENST00000446006 880 ntBASIC13.52□□□□□ -0.25
CAV3P56539 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.52□□□□□ -0.25
CAV3P56539 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CAV3P56539 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.52□□□□□ -0.25
CAV3P56539 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CAV3P56539 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.52□□□□□ -0.25
CAV3P56539 ALG1L8P-201ENST00000533887 760 ntBASIC13.52□□□□□ -0.25
CAV3P56539 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.52□□□□□ -0.25
CAV3P56539 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.52□□□□□ -0.25
CAV3P56539 AC027612.4-201ENST00000605371 583 ntBASIC13.52□□□□□ -0.25
CAV3P56539 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.52□□□□□ -0.25
CAV3P56539 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CAV3P56539 AC138969.3-201ENST00000546612 1459 ntBASIC13.52□□□□□ -0.25
CAV3P56539 AC138932.2-201ENST00000548268 1459 ntBASIC13.52□□□□□ -0.25
CAV3P56539 AC126755.4-201ENST00000549796 1459 ntBASIC13.52□□□□□ -0.25
CAV3P56539 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CAV3P56539 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CAV3P56539 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.52□□□□□ -0.25
CAV3P56539 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.52□□□□□ -0.25
CAV3P56539 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CAV3P56539 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CAV3P56539 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CAV3P56539 C8orf49-201ENST00000525043 1968 ntBASIC13.52□□□□□ -0.25
CAV3P56539 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.52□□□□□ -0.25
CAV3P56539 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.52□□□□□ -0.25
CAV3P56539 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.52□□□□□ -0.25
CAV3P56539 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CAV3P56539 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CAV3P56539 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
CAV3P56539 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CAV3P56539 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CAV3P56539 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CAV3P56539 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CAV3P56539 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CAV3P56539 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CAV3P56539 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.52□□□□□ -0.25
CAV3P56539 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.51□□□□□ -0.25
CAV3P56539 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CAV3P56539 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CAV3P56539 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CAV3P56539 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CAV3P56539 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CAV3P56539 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CAV3P56539 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.51□□□□□ -0.25
CAV3P56539 AC023090.2-201ENST00000625182 2110 ntBASIC13.51□□□□□ -0.25
CAV3P56539 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.51□□□□□ -0.25
CAV3P56539 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.51□□□□□ -0.25
CAV3P56539 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CAV3P56539 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CAV3P56539 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CAV3P56539 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CAV3P56539 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CAV3P56539 AZGP1P1-201ENST00000411909 902 ntBASIC13.51□□□□□ -0.25
CAV3P56539 AC136604.1-201ENST00000418535 575 ntBASIC13.51□□□□□ -0.25
CAV3P56539 RBPMS2P1-201ENST00000437762 623 ntBASIC13.51□□□□□ -0.25
CAV3P56539 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.51□□□□□ -0.25
CAV3P56539 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.51□□□□□ -0.25
CAV3P56539 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.51□□□□□ -0.25
CAV3P56539 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CAV3P56539 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.51□□□□□ -0.25
CAV3P56539 RARRES2P9-201ENST00000565168 469 ntBASIC13.51□□□□□ -0.25
CAV3P56539 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.51□□□□□ -0.25
CAV3P56539 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.51□□□□□ -0.25
CAV3P56539 AP001059.3-201ENST00000619053 235 ntBASIC13.51□□□□□ -0.25
CAV3P56539 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CAV3P56539 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC13.51□□□□□ -0.25
CAV3P56539 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CAV3P56539 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CAV3P56539 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
CAV3P56539 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CAV3P56539 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CAV3P56539 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CAV3P56539 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CAV3P56539 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.51□□□□□ -0.25
CAV3P56539 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CAV3P56539 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CAV3P56539 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CAV3P56539 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CAV3P56539 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CAV3P56539 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CAV3P56539 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.5□□□□□ -0.25
CAV3P56539 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CAV3P56539 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CAV3P56539 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CAV3P56539 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CAV3P56539 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.5□□□□□ -0.25
CAV3P56539 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CAV3P56539 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CAV3P56539 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CAV3P56539 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms