Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VCPP55072 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.17■□□□□ 0.18
VCPP55072 ZBED1P1-201ENST00000502364 1930 ntBASIC16.17■□□□□ 0.18
VCPP55072 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VCPP55072 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.17■□□□□ 0.18
VCPP55072 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VCPP55072 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VCPP55072 MROH4P-201ENST00000431302 1578 ntBASIC16.17■□□□□ 0.18
VCPP55072 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VCPP55072 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VCPP55072 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
VCPP55072 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.16■□□□□ 0.18
VCPP55072 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
VCPP55072 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 MIR600HG-201ENST00000449175 5984 ntBASIC16.16■□□□□ 0.18
VCPP55072 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.16■□□□□ 0.18
VCPP55072 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
VCPP55072 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 C1QBPP1-201ENST00000400117 770 ntBASIC16.16■□□□□ 0.18
VCPP55072 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.16■□□□□ 0.18
VCPP55072 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.16■□□□□ 0.18
VCPP55072 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.16■□□□□ 0.18
VCPP55072 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.16■□□□□ 0.18
VCPP55072 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.16■□□□□ 0.18
VCPP55072 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.16■□□□□ 0.18
VCPP55072 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.16■□□□□ 0.18
VCPP55072 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.16■□□□□ 0.18
VCPP55072 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.16■□□□□ 0.18
VCPP55072 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
VCPP55072 MIR3619-201ENST00000579667 83 ntBASIC16.16■□□□□ 0.18
VCPP55072 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
VCPP55072 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.16■□□□□ 0.18
VCPP55072 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
VCPP55072 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.16■□□□□ 0.18
VCPP55072 AC005252.2-201ENST00000624630 1141 ntBASIC16.16■□□□□ 0.18
VCPP55072 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
VCPP55072 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.16■□□□□ 0.18
VCPP55072 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.16■□□□□ 0.18
VCPP55072 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
VCPP55072 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
VCPP55072 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCPP55072 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VCPP55072 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VCPP55072 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
VCPP55072 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
VCPP55072 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VCPP55072 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
VCPP55072 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.15■□□□□ 0.18
VCPP55072 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VCPP55072 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VCPP55072 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.15■□□□□ 0.18
VCPP55072 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.15■□□□□ 0.18
VCPP55072 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
VCPP55072 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
VCPP55072 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VCPP55072 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VCPP55072 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VCPP55072 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
VCPP55072 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VCPP55072 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
VCPP55072 C2orf27AP3-201ENST00000434123 579 ntBASIC16.15■□□□□ 0.18
VCPP55072 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.15■□□□□ 0.18
VCPP55072 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.15■□□□□ 0.18
VCPP55072 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.15■□□□□ 0.18
VCPP55072 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
VCPP55072 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.15■□□□□ 0.18
VCPP55072 AC120045.2-201ENST00000567334 178 ntBASIC16.15■□□□□ 0.18
VCPP55072 AC104982.3-201ENST00000581995 514 ntBASIC16.15■□□□□ 0.18
VCPP55072 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.15■□□□□ 0.18
VCPP55072 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.15■□□□□ 0.18
VCPP55072 AC097724.1-201ENST00000609581 426 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms