Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.14□□□□□ -0.31
ATP1B3P54709 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.14□□□□□ -0.31
ATP1B3P54709 TREML5P-201ENST00000421694 576 ntBASIC13.14□□□□□ -0.31
ATP1B3P54709 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.14□□□□□ -0.31
ATP1B3P54709 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.14□□□□□ -0.31
ATP1B3P54709 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
ATP1B3P54709 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.14□□□□□ -0.31
ATP1B3P54709 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.14□□□□□ -0.31
ATP1B3P54709 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.14□□□□□ -0.31
ATP1B3P54709 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.14□□□□□ -0.31
ATP1B3P54709 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.14□□□□□ -0.31
ATP1B3P54709 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.14□□□□□ -0.31
ATP1B3P54709 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.14□□□□□ -0.31
ATP1B3P54709 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.14□□□□□ -0.31
ATP1B3P54709 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.14□□□□□ -0.31
ATP1B3P54709 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.14□□□□□ -0.31
ATP1B3P54709 AL590560.3-201ENST00000623350 461 ntBASIC13.14□□□□□ -0.31
ATP1B3P54709 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.14□□□□□ -0.31
ATP1B3P54709 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
ATP1B3P54709 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
ATP1B3P54709 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.14□□□□□ -0.31
ATP1B3P54709 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.14□□□□□ -0.31
ATP1B3P54709 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
ATP1B3P54709 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
ATP1B3P54709 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.14□□□□□ -0.31
ATP1B3P54709 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ATP1B3P54709 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATP1B3P54709 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ATP1B3P54709 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATP1B3P54709 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATP1B3P54709 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATP1B3P54709 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATP1B3P54709 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
ATP1B3P54709 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATP1B3P54709 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATP1B3P54709 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATP1B3P54709 BTBD7P1-201ENST00000447253 1453 ntBASIC13.13□□□□□ -0.31
ATP1B3P54709 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATP1B3P54709 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.13□□□□□ -0.31
ATP1B3P54709 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATP1B3P54709 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATP1B3P54709 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATP1B3P54709 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
ATP1B3P54709 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.13□□□□□ -0.31
ATP1B3P54709 AC092580.3-201ENST00000430932 139 ntBASIC13.13□□□□□ -0.31
ATP1B3P54709 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.13□□□□□ -0.31
ATP1B3P54709 AC241585.1-201ENST00000433527 519 ntBASIC13.13□□□□□ -0.31
ATP1B3P54709 AC114501.2-201ENST00000439631 535 ntBASIC13.13□□□□□ -0.31
ATP1B3P54709 MEIS3P1-201ENST00000495167 958 ntBASIC13.13□□□□□ -0.31
ATP1B3P54709 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.13□□□□□ -0.31
ATP1B3P54709 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.13□□□□□ -0.31
ATP1B3P54709 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATP1B3P54709 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.13□□□□□ -0.31
ATP1B3P54709 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.13□□□□□ -0.31
ATP1B3P54709 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
ATP1B3P54709 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.13□□□□□ -0.31
ATP1B3P54709 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.13□□□□□ -0.31
ATP1B3P54709 AC092337.1-201ENST00000568699 1129 ntBASIC13.13□□□□□ -0.31
ATP1B3P54709 AL844908.2-201ENST00000609461 460 ntBASIC13.13□□□□□ -0.31
ATP1B3P54709 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATP1B3P54709 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ATP1B3P54709 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATP1B3P54709 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.13□□□□□ -0.31
ATP1B3P54709 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATP1B3P54709 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
ATP1B3P54709 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ATP1B3P54709 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
ATP1B3P54709 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATP1B3P54709 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.13□□□□□ -0.31
ATP1B3P54709 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ATP1B3P54709 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATP1B3P54709 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
ATP1B3P54709 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ATP1B3P54709 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.13□□□□□ -0.31
ATP1B3P54709 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.13□□□□□ -0.31
ATP1B3P54709 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATP1B3P54709 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATP1B3P54709 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATP1B3P54709 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATP1B3P54709 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms