Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.39□□□□□ -0.43
NKX2-1P43699 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-1P43699 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
NKX2-1P43699 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
NKX2-1P43699 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-1P43699 CICP20-201ENST00000443330 2801 ntBASIC12.39□□□□□ -0.43
NKX2-1P43699 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
NKX2-1P43699 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-1P43699 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-1P43699 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-1P43699 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-1P43699 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
NKX2-1P43699 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
NKX2-1P43699 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
NKX2-1P43699 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.39□□□□□ -0.43
NKX2-1P43699 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-1P43699 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
NKX2-1P43699 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-1P43699 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-1P43699 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.39□□□□□ -0.43
NKX2-1P43699 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
NKX2-1P43699 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
NKX2-1P43699 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-1P43699 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.39□□□□□ -0.43
NKX2-1P43699 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
NKX2-1P43699 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
NKX2-1P43699 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-1P43699 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
NKX2-1P43699 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
NKX2-1P43699 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.39□□□□□ -0.43
NKX2-1P43699 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.39□□□□□ -0.43
NKX2-1P43699 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-1P43699 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
NKX2-1P43699 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.39□□□□□ -0.43
NKX2-1P43699 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.39□□□□□ -0.43
NKX2-1P43699 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-1P43699 SLED1-202ENST00000512051 380 ntBASIC12.39□□□□□ -0.43
NKX2-1P43699 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.39□□□□□ -0.43
NKX2-1P43699 AC034105.1-201ENST00000563488 319 ntBASIC12.39□□□□□ -0.43
NKX2-1P43699 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.39□□□□□ -0.43
NKX2-1P43699 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.39□□□□□ -0.43
NKX2-1P43699 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.39□□□□□ -0.43
NKX2-1P43699 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-1P43699 AL121894.2-201ENST00000602977 491 ntBASIC12.39□□□□□ -0.43
NKX2-1P43699 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.39□□□□□ -0.43
NKX2-1P43699 AC025181.2-201ENST00000606994 802 ntBASIC12.39□□□□□ -0.43
NKX2-1P43699 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.39□□□□□ -0.43
NKX2-1P43699 BX640515.1-201ENST00000617215 977 ntBASIC12.39□□□□□ -0.43
NKX2-1P43699 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.39□□□□□ -0.43
NKX2-1P43699 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.39□□□□□ -0.43
NKX2-1P43699 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-1P43699 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-1P43699 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-1P43699 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
NKX2-1P43699 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
NKX2-1P43699 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.39□□□□□ -0.43
NKX2-1P43699 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-1P43699 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-1P43699 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-1P43699 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.39□□□□□ -0.43
NKX2-1P43699 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-1P43699 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-1P43699 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
NKX2-1P43699 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.39□□□□□ -0.43
NKX2-1P43699 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-1P43699 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-1P43699 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-1P43699 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.39□□□□□ -0.43
NKX2-1P43699 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.39□□□□□ -0.43
NKX2-1P43699 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-1P43699 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-1P43699 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-1P43699 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-1P43699 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-1P43699 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-1P43699 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
NKX2-1P43699 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-1P43699 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-1P43699 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.38□□□□□ -0.43
NKX2-1P43699 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.38□□□□□ -0.43
NKX2-1P43699 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
NKX2-1P43699 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.38□□□□□ -0.43
NKX2-1P43699 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
NKX2-1P43699 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-1P43699 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-1P43699 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-1P43699 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.38□□□□□ -0.43
NKX2-1P43699 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-1P43699 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.38□□□□□ -0.43
NKX2-1P43699 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-1P43699 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
NKX2-1P43699 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-1P43699 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-1P43699 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-1P43699 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.38□□□□□ -0.43
NKX2-1P43699 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.38□□□□□ -0.43
NKX2-1P43699 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.38□□□□□ -0.43
NKX2-1P43699 AL591424.1-201ENST00000442569 1213 ntBASIC12.38□□□□□ -0.43
NKX2-1P43699 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.38□□□□□ -0.43
NKX2-1P43699 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms