Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A3P43003 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
SLC1A3P43003 AC015656.1-201ENST00000624209 3578 ntBASIC13.9□□□□□ -0.18
SLC1A3P43003 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A3P43003 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A3P43003 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A3P43003 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A3P43003 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.9□□□□□ -0.18
SLC1A3P43003 HSPA7-201ENST00000445535 1927 ntBASIC13.9□□□□□ -0.18
SLC1A3P43003 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SLC1A3P43003 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SLC1A3P43003 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.89□□□□□ -0.19
SLC1A3P43003 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SLC1A3P43003 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SLC1A3P43003 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.89□□□□□ -0.19
SLC1A3P43003 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.89□□□□□ -0.19
SLC1A3P43003 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
SLC1A3P43003 MIR661-201ENST00000384842 89 ntBASIC13.89□□□□□ -0.19
SLC1A3P43003 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.89□□□□□ -0.19
SLC1A3P43003 PIN1P1-201ENST00000412108 996 ntBASIC13.89□□□□□ -0.19
SLC1A3P43003 SOCS2P1-201ENST00000417727 557 ntBASIC13.89□□□□□ -0.19
SLC1A3P43003 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.89□□□□□ -0.19
SLC1A3P43003 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.89□□□□□ -0.19
SLC1A3P43003 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.89□□□□□ -0.19
SLC1A3P43003 MYCLP2-201ENST00000449268 967 ntBASIC13.89□□□□□ -0.19
SLC1A3P43003 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.89□□□□□ -0.19
SLC1A3P43003 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.89□□□□□ -0.19
SLC1A3P43003 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.89□□□□□ -0.19
SLC1A3P43003 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.89□□□□□ -0.19
SLC1A3P43003 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.89□□□□□ -0.19
SLC1A3P43003 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SLC1A3P43003 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.89□□□□□ -0.19
SLC1A3P43003 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.89□□□□□ -0.19
SLC1A3P43003 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SLC1A3P43003 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SLC1A3P43003 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SLC1A3P43003 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.89□□□□□ -0.19
SLC1A3P43003 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.89□□□□□ -0.19
SLC1A3P43003 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SLC1A3P43003 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.89□□□□□ -0.19
SLC1A3P43003 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SLC1A3P43003 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
SLC1A3P43003 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A3P43003 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A3P43003 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
SLC1A3P43003 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.88□□□□□ -0.19
SLC1A3P43003 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.88□□□□□ -0.19
SLC1A3P43003 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A3P43003 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A3P43003 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A3P43003 AC097359.2-201ENST00000604992 2389 ntBASIC13.88□□□□□ -0.19
SLC1A3P43003 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A3P43003 AC113367.3-201ENST00000508316 1912 ntBASIC13.88□□□□□ -0.19
SLC1A3P43003 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
SLC1A3P43003 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
SLC1A3P43003 AC136759.1-202ENST00000530858 2194 ntBASIC13.88□□□□□ -0.19
SLC1A3P43003 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.88□□□□□ -0.19
SLC1A3P43003 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SLC1A3P43003 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A3P43003 AC236430.1-201ENST00000402231 743 ntBASIC13.88□□□□□ -0.19
SLC1A3P43003 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A3P43003 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.88□□□□□ -0.19
SLC1A3P43003 AC098850.1-201ENST00000419919 790 ntBASIC13.88□□□□□ -0.19
SLC1A3P43003 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.88□□□□□ -0.19
SLC1A3P43003 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.88□□□□□ -0.19
SLC1A3P43003 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.88□□□□□ -0.19
SLC1A3P43003 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.88□□□□□ -0.19
SLC1A3P43003 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.88□□□□□ -0.19
SLC1A3P43003 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.88□□□□□ -0.19
SLC1A3P43003 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.88□□□□□ -0.19
SLC1A3P43003 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.88□□□□□ -0.19
SLC1A3P43003 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms