Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN1P35523 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLCN1P35523 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.2■□□□□ 0.34
CLCN1P35523 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN1P35523 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN1P35523 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN1P35523 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLCN1P35523 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLCN1P35523 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.2■□□□□ 0.34
CLCN1P35523 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN1P35523 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN1P35523 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.2■□□□□ 0.34
CLCN1P35523 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLCN1P35523 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN1P35523 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN1P35523 VENTXP1-201ENST00000569334 2716 ntBASIC17.2■□□□□ 0.34
CLCN1P35523 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN1P35523 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN1P35523 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC17.19■□□□□ 0.34
CLCN1P35523 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN1P35523 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CLCN1P35523 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC17.19■□□□□ 0.34
CLCN1P35523 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN1P35523 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN1P35523 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.19■□□□□ 0.34
CLCN1P35523 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CLCN1P35523 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC17.19■□□□□ 0.34
CLCN1P35523 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
CLCN1P35523 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CLCN1P35523 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN1P35523 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN1P35523 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN1P35523 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN1P35523 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CLCN1P35523 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN1P35523 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
CLCN1P35523 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN1P35523 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN1P35523 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.19■□□□□ 0.34
CLCN1P35523 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN1P35523 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.19■□□□□ 0.34
CLCN1P35523 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
CLCN1P35523 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN1P35523 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN1P35523 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN1P35523 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN1P35523 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN1P35523 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC17.19■□□□□ 0.34
CLCN1P35523 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC17.19■□□□□ 0.34
CLCN1P35523 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
CLCN1P35523 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN1P35523 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN1P35523 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC17.19■□□□□ 0.34
CLCN1P35523 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC17.19■□□□□ 0.34
CLCN1P35523 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CLCN1P35523 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN1P35523 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN1P35523 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.18■□□□□ 0.34
CLCN1P35523 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CLCN1P35523 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCN1P35523 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN1P35523 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCN1P35523 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.18■□□□□ 0.34
CLCN1P35523 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCN1P35523 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCN1P35523 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCN1P35523 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC17.18■□□□□ 0.34
CLCN1P35523 AC018892.3-201ENST00000623986 2499 ntBASIC17.18■□□□□ 0.34
CLCN1P35523 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CLCN1P35523 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CLCN1P35523 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN1P35523 RPS8P6-201ENST00000426177 609 ntBASIC17.18■□□□□ 0.34
CLCN1P35523 AC005237.2-201ENST00000434368 219 ntBASIC17.18■□□□□ 0.34
CLCN1P35523 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.18■□□□□ 0.34
CLCN1P35523 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN1P35523 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.18■□□□□ 0.34
CLCN1P35523 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCN1P35523 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.18■□□□□ 0.34
CLCN1P35523 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCN1P35523 RARRES2P9-201ENST00000565168 469 ntBASIC17.18■□□□□ 0.34
CLCN1P35523 MIR3687-2-201ENST00000577708 61 ntBASIC17.18■□□□□ 0.34
CLCN1P35523 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.18■□□□□ 0.34
CLCN1P35523 MIR3687-1-201ENST00000614492 61 ntBASIC17.18■□□□□ 0.34
CLCN1P35523 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN1P35523 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CLCN1P35523 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN1P35523 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CLCN1P35523 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN1P35523 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCN1P35523 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN1P35523 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN1P35523 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN1P35523 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCN1P35523 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CLCN1P35523 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN1P35523 MIR600HG-201ENST00000449175 5984 ntBASIC17.17■□□□□ 0.34
CLCN1P35523 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN1P35523 TRIM80P-201ENST00000455685 2848 ntBASIC17.17■□□□□ 0.34
CLCN1P35523 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN1P35523 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms