Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RXRBP28702 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RXRBP28702 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC19.12■□□□□ 0.65
RXRBP28702 AC138761.6-201ENST00000583997 1423 ntBASIC19.12■□□□□ 0.65
RXRBP28702 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RXRBP28702 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RXRBP28702 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RXRBP28702 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC19.12■□□□□ 0.65
RXRBP28702 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RXRBP28702 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC19.12■□□□□ 0.65
RXRBP28702 TREX1-203ENST00000456089 629 ntTSL 3 BASIC19.12■□□□□ 0.65
RXRBP28702 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC19.12■□□□□ 0.65
RXRBP28702 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC19.12■□□□□ 0.65
RXRBP28702 AC016582.2-202ENST00000587765 1094 ntBASIC19.12■□□□□ 0.65
RXRBP28702 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC19.12■□□□□ 0.65
RXRBP28702 AL359091.4-201ENST00000610052 409 ntBASIC19.12■□□□□ 0.65
RXRBP28702 URAHP-205ENST00000610227 398 ntBASIC19.12■□□□□ 0.65
RXRBP28702 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RXRBP28702 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RXRBP28702 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.12■□□□□ 0.65
RXRBP28702 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RXRBP28702 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
RXRBP28702 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
RXRBP28702 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RXRBP28702 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RXRBP28702 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RXRBP28702 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RXRBP28702 AC112504.1-201ENST00000623415 1841 ntBASIC19.11■□□□□ 0.65
RXRBP28702 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RXRBP28702 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC19.11■□□□□ 0.65
RXRBP28702 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RXRBP28702 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC19.11■□□□□ 0.65
RXRBP28702 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
RXRBP28702 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RXRBP28702 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RXRBP28702 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC19.11■□□□□ 0.65
RXRBP28702 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
RXRBP28702 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RXRBP28702 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RXRBP28702 HNRNPA1P2-207ENST00000432375 960 ntBASIC19.11■□□□□ 0.65
RXRBP28702 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
RXRBP28702 POLR2LP1-206ENST00000444785 187 ntBASIC19.11■□□□□ 0.65
RXRBP28702 SNRPD2P2-201ENST00000473818 333 ntBASIC19.11■□□□□ 0.65
RXRBP28702 AC022447.5-201ENST00000504817 392 ntBASIC19.11■□□□□ 0.65
RXRBP28702 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC19.11■□□□□ 0.65
RXRBP28702 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC19.11■□□□□ 0.65
RXRBP28702 AP001462.1-201ENST00000594089 452 ntBASIC19.11■□□□□ 0.65
RXRBP28702 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
RXRBP28702 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RXRBP28702 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RXRBP28702 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.11■□□□□ 0.65
RXRBP28702 AL591122.2-201ENST00000624125 1853 ntBASIC19.11■□□□□ 0.65
RXRBP28702 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RXRBP28702 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RXRBP28702 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
RXRBP28702 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RXRBP28702 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RXRBP28702 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RXRBP28702 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RXRBP28702 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.1■□□□□ 0.65
RXRBP28702 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RXRBP28702 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RXRBP28702 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RXRBP28702 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC19.1■□□□□ 0.65
RXRBP28702 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RXRBP28702 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC19.1■□□□□ 0.65
RXRBP28702 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RXRBP28702 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RXRBP28702 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC19.1■□□□□ 0.65
RXRBP28702 KRT8P6-201ENST00000399259 1207 ntBASIC19.1■□□□□ 0.65
RXRBP28702 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC19.1■□□□□ 0.65
RXRBP28702 AL954722.1-201ENST00000431238 259 ntBASIC19.1■□□□□ 0.65
RXRBP28702 HNRNPA1P56-201ENST00000505767 954 ntBASIC19.1■□□□□ 0.65
RXRBP28702 AC004923.3-201ENST00000527532 355 ntBASIC19.1■□□□□ 0.65
RXRBP28702 NAA40-205ENST00000539656 577 ntTSL 4 BASIC19.1■□□□□ 0.65
RXRBP28702 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC19.1■□□□□ 0.65
RXRBP28702 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC19.1■□□□□ 0.65
RXRBP28702 DERL2-206ENST00000572834 589 ntTSL 3 BASIC19.1■□□□□ 0.65
RXRBP28702 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
RXRBP28702 AC005746.3-201ENST00000614751 393 ntBASIC19.1■□□□□ 0.65
RXRBP28702 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
RXRBP28702 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RXRBP28702 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RXRBP28702 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RXRBP28702 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RXRBP28702 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RXRBP28702 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RXRBP28702 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RXRBP28702 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
RXRBP28702 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RXRBP28702 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RXRBP28702 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RXRBP28702 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC19.09■□□□□ 0.65
RXRBP28702 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RXRBP28702 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RXRBP28702 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RXRBP28702 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RXRBP28702 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RXRBP28702 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.09■□□□□ 0.65
RXRBP28702 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms