Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.34■□□□□ 0.05
PTPN3P26045 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN3P26045 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN3P26045 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PTPN3P26045 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PTPN3P26045 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.33■□□□□ 0.05
PTPN3P26045 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.33■□□□□ 0.05
PTPN3P26045 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PTPN3P26045 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PTPN3P26045 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
PTPN3P26045 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.33■□□□□ 0.05
PTPN3P26045 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PTPN3P26045 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PTPN3P26045 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PTPN3P26045 AC139749.1-202ENST00000617529 3139 ntBASIC15.33■□□□□ 0.05
PTPN3P26045 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
PTPN3P26045 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN3P26045 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.33■□□□□ 0.04
PTPN3P26045 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN3P26045 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN3P26045 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.33■□□□□ 0.04
PTPN3P26045 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
PTPN3P26045 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN3P26045 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN3P26045 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN3P26045 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PTPN3P26045 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN3P26045 AC098614.1-201ENST00000368528 745 ntBASIC15.33■□□□□ 0.04
PTPN3P26045 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN3P26045 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN3P26045 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.33■□□□□ 0.04
PTPN3P26045 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN3P26045 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.33■□□□□ 0.04
PTPN3P26045 TDH-203ENST00000531764 1110 ntBASIC15.33■□□□□ 0.04
PTPN3P26045 PTP4A1P2-201ENST00000546033 454 ntBASIC15.33■□□□□ 0.04
PTPN3P26045 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
PTPN3P26045 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN3P26045 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN3P26045 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN3P26045 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
PTPN3P26045 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PTPN3P26045 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PTPN3P26045 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN3P26045 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
PTPN3P26045 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN3P26045 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.33■□□□□ 0.04
PTPN3P26045 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.33■□□□□ 0.04
PTPN3P26045 AL354702.1-201ENST00000442006 1960 ntBASIC15.33■□□□□ 0.04
PTPN3P26045 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN3P26045 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN3P26045 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN3P26045 AL136379.1-201ENST00000623471 2642 ntBASIC15.32■□□□□ 0.04
PTPN3P26045 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN3P26045 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN3P26045 AC005089.1-201ENST00000619486 2241 ntBASIC15.32■□□□□ 0.04
PTPN3P26045 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN3P26045 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PTPN3P26045 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN3P26045 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN3P26045 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN3P26045 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN3P26045 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN3P26045 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN3P26045 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN3P26045 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PTPN3P26045 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN3P26045 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PTPN3P26045 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.32■□□□□ 0.04
PTPN3P26045 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.32■□□□□ 0.04
PTPN3P26045 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
PTPN3P26045 FO681548.1-201ENST00000455617 1132 ntBASIC15.32■□□□□ 0.04
PTPN3P26045 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN3P26045 RN7SL837P-201ENST00000463010 287 ntBASIC15.32■□□□□ 0.04
PTPN3P26045 RN7SL752P-201ENST00000463779 287 ntBASIC15.32■□□□□ 0.04
PTPN3P26045 AC068587.3-201ENST00000526613 355 ntBASIC15.32■□□□□ 0.04
PTPN3P26045 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN3P26045 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.32■□□□□ 0.04
PTPN3P26045 AC145423.3-201ENST00000615987 467 ntBASIC15.32■□□□□ 0.04
PTPN3P26045 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN3P26045 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN3P26045 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PTPN3P26045 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN3P26045 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN3P26045 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PTPN3P26045 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN3P26045 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN3P26045 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN3P26045 AC003102.2-201ENST00000589195 1469 ntBASIC15.32■□□□□ 0.04
PTPN3P26045 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN3P26045 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN3P26045 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.32■□□□□ 0.04
PTPN3P26045 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN3P26045 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.31■□□□□ 0.04
PTPN3P26045 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN3P26045 BX640514.1-201ENST00000583223 1918 ntBASIC15.31■□□□□ 0.04
PTPN3P26045 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PTPN3P26045 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN3P26045 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms