Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
CHMP24386 DGCR5-201ENST00000399539 862 ntBASIC14.14□□□□□ -0.15
CHMP24386 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.14□□□□□ -0.15
CHMP24386 COX5BP8-201ENST00000416911 349 ntBASIC14.14□□□□□ -0.15
CHMP24386 FAM86LP-201ENST00000478302 853 ntBASIC14.14□□□□□ -0.15
CHMP24386 RPL13AP25-201ENST00000484130 612 ntBASIC14.14□□□□□ -0.15
CHMP24386 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.14□□□□□ -0.15
CHMP24386 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.14□□□□□ -0.15
CHMP24386 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CHMP24386 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CHMP24386 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
CHMP24386 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.14□□□□□ -0.15
CHMP24386 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.14□□□□□ -0.15
CHMP24386 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHMP24386 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
CHMP24386 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHMP24386 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHMP24386 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHMP24386 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.14□□□□□ -0.15
CHMP24386 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHMP24386 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHMP24386 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHMP24386 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CHMP24386 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.14□□□□□ -0.15
CHMP24386 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.14□□□□□ -0.15
CHMP24386 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CHMP24386 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHMP24386 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
CHMP24386 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CHMP24386 AL359183.1-201ENST00000623796 2132 ntBASIC14.14□□□□□ -0.15
CHMP24386 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHMP24386 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.14□□□□□ -0.15
CHMP24386 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CHMP24386 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CHMP24386 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.13□□□□□ -0.15
CHMP24386 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CHMP24386 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.13□□□□□ -0.15
CHMP24386 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
CHMP24386 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CHMP24386 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CHMP24386 AL442647.2-201ENST00000429864 857 ntBASIC14.13□□□□□ -0.15
CHMP24386 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.13□□□□□ -0.15
CHMP24386 ELK1P1-201ENST00000485699 580 ntBASIC14.13□□□□□ -0.15
CHMP24386 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CHMP24386 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.13□□□□□ -0.15
CHMP24386 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.13□□□□□ -0.15
CHMP24386 AC092552.1-201ENST00000547243 906 ntBASIC14.13□□□□□ -0.15
CHMP24386 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CHMP24386 AL121723.1-201ENST00000445194 1519 ntBASIC14.13□□□□□ -0.15
CHMP24386 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CHMP24386 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
CHMP24386 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.13□□□□□ -0.15
CHMP24386 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CHMP24386 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.13□□□□□ -0.15
CHMP24386 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHMP24386 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.13□□□□□ -0.15
CHMP24386 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.13□□□□□ -0.15
CHMP24386 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.12□□□□□ -0.15
CHMP24386 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHMP24386 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CHMP24386 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHMP24386 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHMP24386 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHMP24386 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHMP24386 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CHMP24386 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHMP24386 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHMP24386 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
CHMP24386 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.12□□□□□ -0.15
CHMP24386 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms