Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 AC092135.3-201ENST00000624151 1846 ntBASIC14.04□□□□□ -0.16
TNFRSF1BP20333 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 AC107890.1-201ENST00000422478 521 ntBASIC14.03□□□□□ -0.16
TNFRSF1BP20333 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 AC097493.3-201ENST00000509725 367 ntBASIC14.03□□□□□ -0.16
TNFRSF1BP20333 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 AC004449.1-201ENST00000564240 433 ntBASIC14.03□□□□□ -0.16
TNFRSF1BP20333 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 AC100757.3-201ENST00000622361 1406 ntBASIC14.03□□□□□ -0.16
TNFRSF1BP20333 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 AL158070.2-201ENST00000623713 1621 ntBASIC14.03□□□□□ -0.16
TNFRSF1BP20333 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 AC055811.4-201ENST00000624039 1754 ntBASIC14.03□□□□□ -0.16
TNFRSF1BP20333 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF1BP20333 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.02□□□□□ -0.16
TNFRSF1BP20333 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
TNFRSF1BP20333 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.02□□□□□ -0.16
TNFRSF1BP20333 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TNFRSF1BP20333 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.02□□□□□ -0.16
TNFRSF1BP20333 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.02□□□□□ -0.16
TNFRSF1BP20333 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TNFRSF1BP20333 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
TNFRSF1BP20333 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TNFRSF1BP20333 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TNFRSF1BP20333 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.02□□□□□ -0.16
TNFRSF1BP20333 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TNFRSF1BP20333 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.02□□□□□ -0.16
TNFRSF1BP20333 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TNFRSF1BP20333 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TNFRSF1BP20333 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TNFRSF1BP20333 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TNFRSF1BP20333 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TNFRSF1BP20333 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TNFRSF1BP20333 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 GAPDHP40-201ENST00000505218 1006 ntBASIC14.02□□□□□ -0.17
TNFRSF1BP20333 AC022447.6-201ENST00000515522 438 ntBASIC14.02□□□□□ -0.17
TNFRSF1BP20333 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms