Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT4P19013 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
KRT4P19013 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT4P19013 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT4P19013 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT4P19013 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT4P19013 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT4P19013 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT4P19013 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT4P19013 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT4P19013 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT4P19013 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT4P19013 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT4P19013 PGAM5P1-201ENST00000518923 814 ntBASIC15.16■□□□□ 0.02
KRT4P19013 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT4P19013 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT4P19013 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT4P19013 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.16■□□□□ 0.02
KRT4P19013 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT4P19013 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT4P19013 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.16■□□□□ 0.02
KRT4P19013 MIR6080-201ENST00000617359 66 ntBASIC15.16■□□□□ 0.02
KRT4P19013 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT4P19013 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT4P19013 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT4P19013 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT4P19013 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT4P19013 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT4P19013 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT4P19013 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT4P19013 AC016397.2-201ENST00000624848 1985 ntBASIC15.16■□□□□ 0.02
KRT4P19013 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
KRT4P19013 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT4P19013 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT4P19013 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT4P19013 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
KRT4P19013 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT4P19013 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT4P19013 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT4P19013 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT4P19013 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT4P19013 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT4P19013 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT4P19013 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT4P19013 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT4P19013 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
KRT4P19013 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT4P19013 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT4P19013 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.15■□□□□ 0.02
KRT4P19013 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
KRT4P19013 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT4P19013 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT4P19013 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT4P19013 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT4P19013 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.15■□□□□ 0.02
KRT4P19013 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT4P19013 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.15■□□□□ 0.02
KRT4P19013 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
KRT4P19013 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.15■□□□□ 0.02
KRT4P19013 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.15■□□□□ 0.02
KRT4P19013 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT4P19013 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT4P19013 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT4P19013 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT4P19013 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT4P19013 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
KRT4P19013 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT4P19013 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.15■□□□□ 0.02
KRT4P19013 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT4P19013 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT4P19013 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT4P19013 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.15■□□□□ 0.02
KRT4P19013 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT4P19013 AC087386.2-201ENST00000623212 4637 ntBASIC15.15■□□□□ 0.02
KRT4P19013 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT4P19013 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT4P19013 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KRT4P19013 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT4P19013 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KRT4P19013 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT4P19013 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.14■□□□□ 0.01
KRT4P19013 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
KRT4P19013 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.14■□□□□ 0.01
KRT4P19013 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT4P19013 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT4P19013 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT4P19013 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KRT4P19013 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.14■□□□□ 0.01
KRT4P19013 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT4P19013 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.14■□□□□ 0.01
KRT4P19013 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KRT4P19013 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
KRT4P19013 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.14■□□□□ 0.01
KRT4P19013 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT4P19013 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KRT4P19013 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.14■□□□□ 0.01
KRT4P19013 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KRT4P19013 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
KRT4P19013 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
KRT4P19013 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms