Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATF3P18847 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATF3P18847 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATF3P18847 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC20.24■□□□□ 0.83
ATF3P18847 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC20.23■□□□□ 0.83
ATF3P18847 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATF3P18847 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ATF3P18847 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ATF3P18847 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.23■□□□□ 0.83
ATF3P18847 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATF3P18847 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATF3P18847 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATF3P18847 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC20.23■□□□□ 0.83
ATF3P18847 AC006372.4-201ENST00000624122 1543 ntBASIC20.23■□□□□ 0.83
ATF3P18847 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ATF3P18847 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC20.23■□□□□ 0.83
ATF3P18847 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ATF3P18847 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATF3P18847 SUPT20HL2-201ENST00000486479 2409 ntBASIC20.23■□□□□ 0.83
ATF3P18847 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATF3P18847 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATF3P18847 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATF3P18847 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATF3P18847 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ATF3P18847 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ATF3P18847 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC20.23■□□□□ 0.83
ATF3P18847 ACTG1P19-201ENST00000418987 1116 ntBASIC20.23■□□□□ 0.83
ATF3P18847 OR51A9P-201ENST00000422578 911 ntBASIC20.23■□□□□ 0.83
ATF3P18847 AL513523.2-202ENST00000427283 2040 ntBASIC20.23■□□□□ 0.83
ATF3P18847 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC20.23■□□□□ 0.83
ATF3P18847 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC20.23■□□□□ 0.83
ATF3P18847 GNG10P1-201ENST00000452289 199 ntBASIC20.23■□□□□ 0.83
ATF3P18847 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC20.23■□□□□ 0.83
ATF3P18847 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ATF3P18847 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC20.23■□□□□ 0.83
ATF3P18847 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC20.23■□□□□ 0.83
ATF3P18847 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC20.23■□□□□ 0.83
ATF3P18847 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC20.23■□□□□ 0.83
ATF3P18847 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC20.23■□□□□ 0.83
ATF3P18847 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATF3P18847 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATF3P18847 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATF3P18847 R3HDM2P2-201ENST00000401880 2116 ntBASIC20.23■□□□□ 0.83
ATF3P18847 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATF3P18847 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC20.22■□□□□ 0.83
ATF3P18847 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC20.22■□□□□ 0.83
ATF3P18847 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC20.22■□□□□ 0.83
ATF3P18847 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ATF3P18847 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATF3P18847 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC20.22■□□□□ 0.83
ATF3P18847 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC20.22■□□□□ 0.83
ATF3P18847 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATF3P18847 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC20.22■□□□□ 0.83
ATF3P18847 RN7SL277P-201ENST00000481521 288 ntBASIC20.22■□□□□ 0.83
ATF3P18847 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC20.22■□□□□ 0.83
ATF3P18847 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATF3P18847 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC20.22■□□□□ 0.83
ATF3P18847 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC20.22■□□□□ 0.83
ATF3P18847 AL627230.2-201ENST00000613254 655 ntBASIC20.22■□□□□ 0.83
ATF3P18847 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ATF3P18847 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC20.22■□□□□ 0.83
ATF3P18847 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC20.22■□□□□ 0.83
ATF3P18847 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATF3P18847 AC025183.3-201ENST00000623526 1482 ntBASIC20.22■□□□□ 0.83
ATF3P18847 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATF3P18847 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC20.22■□□□□ 0.83
ATF3P18847 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATF3P18847 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATF3P18847 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC20.22■□□□□ 0.83
ATF3P18847 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATF3P18847 AL603832.2-201ENST00000566195 2125 ntBASIC20.21■□□□□ 0.83
ATF3P18847 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC20.21■□□□□ 0.83
ATF3P18847 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ATF3P18847 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
ATF3P18847 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATF3P18847 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATF3P18847 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC20.21■□□□□ 0.83
ATF3P18847 UROS-201ENST00000368774 744 ntTSL 2 BASIC20.21■□□□□ 0.83
ATF3P18847 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC20.21■□□□□ 0.83
ATF3P18847 MIR645-201ENST00000385283 94 ntBASIC20.21■□□□□ 0.83
ATF3P18847 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC20.21■□□□□ 0.83
ATF3P18847 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATF3P18847 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC20.21■□□□□ 0.83
ATF3P18847 SERBP1P2-201ENST00000436888 1164 ntBASIC20.21■□□□□ 0.83
ATF3P18847 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC20.21■□□□□ 0.83
ATF3P18847 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ATF3P18847 AC063952.3-201ENST00000467756 308 ntBASIC20.21■□□□□ 0.83
ATF3P18847 RNA5SP406-201ENST00000516106 112 ntBASIC20.21■□□□□ 0.83
ATF3P18847 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC20.21■□□□□ 0.83
ATF3P18847 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC20.21■□□□□ 0.83
ATF3P18847 ABHD17AP9-201ENST00000561925 548 ntBASIC20.21■□□□□ 0.83
ATF3P18847 RPS5-204ENST00000598098 536 ntTSL 2 BASIC20.21■□□□□ 0.83
ATF3P18847 SIGLEC22P-201ENST00000599104 714 ntBASIC20.21■□□□□ 0.83
ATF3P18847 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC20.21■□□□□ 0.83
ATF3P18847 AC009145.4-201ENST00000625119 1294 ntBASIC20.21■□□□□ 0.83
ATF3P18847 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC20.21■□□□□ 0.83
ATF3P18847 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC20.21■□□□□ 0.83
ATF3P18847 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATF3P18847 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATF3P18847 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms