Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GAP43P17677 AC106886.1-201ENST00000568660 600 ntBASIC16.56■□□□□ 0.24
GAP43P17677 ECM1P1-201ENST00000604092 1279 ntBASIC16.56■□□□□ 0.24
GAP43P17677 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.56■□□□□ 0.24
GAP43P17677 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.56■□□□□ 0.24
GAP43P17677 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GAP43P17677 MIR600HG-201ENST00000449175 5984 ntBASIC16.56■□□□□ 0.24
GAP43P17677 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
GAP43P17677 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.56■□□□□ 0.24
GAP43P17677 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GAP43P17677 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GAP43P17677 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.56■□□□□ 0.24
GAP43P17677 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GAP43P17677 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GAP43P17677 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
GAP43P17677 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
GAP43P17677 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.56■□□□□ 0.24
GAP43P17677 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
GAP43P17677 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.55■□□□□ 0.24
GAP43P17677 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GAP43P17677 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
GAP43P17677 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GAP43P17677 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GAP43P17677 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GAP43P17677 FKBP4P6-201ENST00000457486 1332 ntBASIC16.55■□□□□ 0.24
GAP43P17677 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.55■□□□□ 0.24
GAP43P17677 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.55■□□□□ 0.24
GAP43P17677 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.55■□□□□ 0.24
GAP43P17677 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.55■□□□□ 0.24
GAP43P17677 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.55■□□□□ 0.24
GAP43P17677 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.55■□□□□ 0.24
GAP43P17677 AC131206.1-201ENST00000538078 1211 ntBASIC16.55■□□□□ 0.24
GAP43P17677 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.55■□□□□ 0.24
GAP43P17677 KRT90P-201ENST00000549264 1064 ntBASIC16.55■□□□□ 0.24
GAP43P17677 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.55■□□□□ 0.24
GAP43P17677 AC244669.2-201ENST00000612320 853 ntBASIC16.55■□□□□ 0.24
GAP43P17677 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
GAP43P17677 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.55■□□□□ 0.24
GAP43P17677 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.55■□□□□ 0.24
GAP43P17677 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.55■□□□□ 0.24
GAP43P17677 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
GAP43P17677 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
GAP43P17677 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GAP43P17677 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GAP43P17677 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
GAP43P17677 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
GAP43P17677 OR2I1P-209ENST00000641730 5365 ntBASIC16.55■□□□□ 0.24
GAP43P17677 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
GAP43P17677 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
GAP43P17677 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GAP43P17677 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GAP43P17677 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GAP43P17677 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
GAP43P17677 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GAP43P17677 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GAP43P17677 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GAP43P17677 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GAP43P17677 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
GAP43P17677 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GAP43P17677 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.54■□□□□ 0.24
GAP43P17677 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
GAP43P17677 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GAP43P17677 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GAP43P17677 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
GAP43P17677 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GAP43P17677 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.54■□□□□ 0.24
GAP43P17677 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
GAP43P17677 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.54■□□□□ 0.24
GAP43P17677 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GAP43P17677 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
GAP43P17677 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.54■□□□□ 0.24
GAP43P17677 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GAP43P17677 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.54■□□□□ 0.24
GAP43P17677 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
GAP43P17677 ARSEP1-201ENST00000420443 635 ntBASIC16.54■□□□□ 0.24
GAP43P17677 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GAP43P17677 FAM197Y7-201ENST00000432892 766 ntBASIC16.54■□□□□ 0.24
GAP43P17677 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
GAP43P17677 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.54■□□□□ 0.24
GAP43P17677 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.54■□□□□ 0.24
GAP43P17677 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GAP43P17677 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.54■□□□□ 0.24
GAP43P17677 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.54■□□□□ 0.24
GAP43P17677 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.54■□□□□ 0.24
GAP43P17677 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GAP43P17677 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GAP43P17677 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GAP43P17677 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
GAP43P17677 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
GAP43P17677 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GAP43P17677 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GAP43P17677 AC011840.2-201ENST00000563063 1520 ntBASIC16.54■□□□□ 0.24
GAP43P17677 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GAP43P17677 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
GAP43P17677 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.54■□□□□ 0.24
GAP43P17677 AC126755.1-201ENST00000525846 6405 ntBASIC16.54■□□□□ 0.24
GAP43P17677 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
GAP43P17677 AP000593.2-201ENST00000542775 1433 ntBASIC16.53■□□□□ 0.24
GAP43P17677 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GAP43P17677 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms