Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 TEX28P1-201ENST00000613479 1221 ntBASIC12.8□□□□□ -0.36
HIST1H1DP16402 TEX28P2-201ENST00000617764 1221 ntBASIC12.8□□□□□ -0.36
HIST1H1DP16402 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1DP16402 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
HIST1H1DP16402 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
HIST1H1DP16402 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
HIST1H1DP16402 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H1DP16402 AL137784.3-201ENST00000623858 2288 ntBASIC12.79□□□□□ -0.36
HIST1H1DP16402 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1DP16402 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.79□□□□□ -0.36
HIST1H1DP16402 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H1DP16402 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1DP16402 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H1DP16402 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
HIST1H1DP16402 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1DP16402 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H1DP16402 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H1DP16402 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.79□□□□□ -0.36
HIST1H1DP16402 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1DP16402 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
HIST1H1DP16402 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HIST1H1DP16402 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H1DP16402 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1DP16402 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1DP16402 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1DP16402 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1DP16402 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HIST1H1DP16402 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1DP16402 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1DP16402 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H1DP16402 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
HIST1H1DP16402 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
HIST1H1DP16402 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1DP16402 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1DP16402 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
HIST1H1DP16402 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1DP16402 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1DP16402 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1DP16402 MIR574-201ENST00000385209 96 ntBASIC12.79□□□□□ -0.36
HIST1H1DP16402 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.79□□□□□ -0.36
HIST1H1DP16402 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H1DP16402 HLA-K-203ENST00000430151 1046 ntBASIC12.79□□□□□ -0.36
HIST1H1DP16402 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H1DP16402 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H1DP16402 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms