Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL2P13500 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL2P13500 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.16□□□□□ -0.3
CCL2P13500 CROCCP4-201ENST00000457096 498 ntBASIC13.16□□□□□ -0.3
CCL2P13500 AC022616.1-201ENST00000518688 554 ntBASIC13.16□□□□□ -0.3
CCL2P13500 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL2P13500 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL2P13500 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL2P13500 BTNL10-201ENST00000595971 695 ntBASIC13.16□□□□□ -0.3
CCL2P13500 AC233724.13-201ENST00000598383 410 ntBASIC13.16□□□□□ -0.3
CCL2P13500 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.16□□□□□ -0.3
CCL2P13500 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL2P13500 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CCL2P13500 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL2P13500 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL2P13500 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL2P13500 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL2P13500 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL2P13500 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL2P13500 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL2P13500 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL2P13500 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL2P13500 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
CCL2P13500 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
CCL2P13500 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL2P13500 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL2P13500 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL2P13500 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL2P13500 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL2P13500 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL2P13500 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL2P13500 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
CCL2P13500 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CCL2P13500 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CCL2P13500 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 AC063926.2-201ENST00000623766 1308 ntBASIC13.15□□□□□ -0.3
CCL2P13500 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CCL2P13500 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL2P13500 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 FGD5P1-202ENST00000614866 2498 ntBASIC13.15□□□□□ -0.3
CCL2P13500 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
CCL2P13500 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL2P13500 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL2P13500 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL2P13500 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL2P13500 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.15□□□□□ -0.3
CCL2P13500 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.15□□□□□ -0.3
CCL2P13500 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL2P13500 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL2P13500 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.15□□□□□ -0.3
CCL2P13500 AC026434.2-201ENST00000506094 1078 ntBASIC13.15□□□□□ -0.3
CCL2P13500 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.15□□□□□ -0.3
CCL2P13500 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL2P13500 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.15□□□□□ -0.3
CCL2P13500 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.15□□□□□ -0.3
CCL2P13500 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL2P13500 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL2P13500 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL2P13500 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL2P13500 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CCL2P13500 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
CCL2P13500 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL2P13500 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 CICP23-201ENST00000605013 2741 ntBASIC13.15□□□□□ -0.3
CCL2P13500 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CCL2P13500 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL2P13500 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CCL2P13500 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CCL2P13500 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL2P13500 AC023090.2-201ENST00000625182 2110 ntBASIC13.15□□□□□ -0.3
CCL2P13500 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
CCL2P13500 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.15□□□□□ -0.31
CCL2P13500 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CCL2P13500 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CCL2P13500 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.15□□□□□ -0.31
CCL2P13500 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms