Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TOP1P11387 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
TOP1P11387 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.69■□□□□ 0.42
TOP1P11387 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TOP1P11387 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP1P11387 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP1P11387 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.69■□□□□ 0.42
TOP1P11387 AC106881.1-201ENST00000605849 3329 ntBASIC17.69■□□□□ 0.42
TOP1P11387 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP1P11387 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TOP1P11387 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.69■□□□□ 0.42
TOP1P11387 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP1P11387 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TOP1P11387 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP1P11387 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP1P11387 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP1P11387 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP1P11387 REXO1L2P-201ENST00000425429 2069 ntBASIC17.69■□□□□ 0.42
TOP1P11387 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TOP1P11387 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.69■□□□□ 0.42
TOP1P11387 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP1P11387 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.69■□□□□ 0.42
TOP1P11387 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP1P11387 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TOP1P11387 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.69■□□□□ 0.42
TOP1P11387 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TOP1P11387 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP1P11387 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TOP1P11387 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP1P11387 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP1P11387 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TOP1P11387 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOP1P11387 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP1P11387 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP1P11387 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TOP1P11387 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TOP1P11387 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TOP1P11387 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP1P11387 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.68■□□□□ 0.42
TOP1P11387 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TOP1P11387 AL354989.2-201ENST00000435838 1540 ntBASIC17.68■□□□□ 0.42
TOP1P11387 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TOP1P11387 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TOP1P11387 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.68■□□□□ 0.42
TOP1P11387 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.68■□□□□ 0.42
TOP1P11387 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP1P11387 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP1P11387 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TOP1P11387 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP1P11387 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP1P11387 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.68■□□□□ 0.42
TOP1P11387 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP1P11387 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.68■□□□□ 0.42
TOP1P11387 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.68■□□□□ 0.42
TOP1P11387 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.68■□□□□ 0.42
TOP1P11387 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TOP1P11387 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TOP1P11387 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.68■□□□□ 0.42
TOP1P11387 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.68■□□□□ 0.42
TOP1P11387 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.68■□□□□ 0.42
TOP1P11387 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.68■□□□□ 0.42
TOP1P11387 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.68■□□□□ 0.42
TOP1P11387 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TOP1P11387 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TOP1P11387 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TOP1P11387 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP1P11387 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.68■□□□□ 0.42
TOP1P11387 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TOP1P11387 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP1P11387 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP1P11387 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP1P11387 CLUHP2-201ENST00000426660 1303 ntBASIC17.68■□□□□ 0.42
TOP1P11387 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.68■□□□□ 0.42
TOP1P11387 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP1P11387 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP1P11387 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TOP1P11387 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP1P11387 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOP1P11387 AC091951.1-201ENST00000512854 2465 ntBASIC17.67■□□□□ 0.42
TOP1P11387 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TOP1P11387 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TOP1P11387 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TOP1P11387 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TOP1P11387 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TOP1P11387 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TOP1P11387 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TOP1P11387 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TOP1P11387 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TOP1P11387 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.67■□□□□ 0.42
TOP1P11387 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TOP1P11387 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
TOP1P11387 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TOP1P11387 FAM8A4P-201ENST00000435433 1213 ntBASIC17.67■□□□□ 0.42
TOP1P11387 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.67■□□□□ 0.42
TOP1P11387 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.67■□□□□ 0.42
TOP1P11387 MESTP3-201ENST00000503460 968 ntBASIC17.67■□□□□ 0.42
TOP1P11387 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.67■□□□□ 0.42
TOP1P11387 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.67■□□□□ 0.42
TOP1P11387 AC010328.2-201ENST00000597698 1111 ntBASIC17.67■□□□□ 0.42
TOP1P11387 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms