Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.12□□□□□ -0.31
CSF1P09603 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.12□□□□□ -0.31
CSF1P09603 AL135744.1-201ENST00000565098 629 ntBASIC13.12□□□□□ -0.31
CSF1P09603 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.12□□□□□ -0.31
CSF1P09603 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSF1P09603 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.12□□□□□ -0.31
CSF1P09603 AC138649.4-201ENST00000612222 287 ntBASIC13.12□□□□□ -0.31
CSF1P09603 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSF1P09603 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.12□□□□□ -0.31
CSF1P09603 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSF1P09603 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CSF1P09603 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSF1P09603 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.12□□□□□ -0.31
CSF1P09603 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CSF1P09603 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSF1P09603 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.12□□□□□ -0.31
CSF1P09603 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSF1P09603 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSF1P09603 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSF1P09603 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CSF1P09603 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CSF1P09603 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CSF1P09603 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSF1P09603 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSF1P09603 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSF1P09603 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CSF1P09603 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSF1P09603 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSF1P09603 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.11□□□□□ -0.31
CSF1P09603 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSF1P09603 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSF1P09603 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CSF1P09603 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSF1P09603 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSF1P09603 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSF1P09603 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSF1P09603 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSF1P09603 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CSF1P09603 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.11□□□□□ -0.31
CSF1P09603 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.11□□□□□ -0.31
CSF1P09603 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSF1P09603 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSF1P09603 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.11□□□□□ -0.31
CSF1P09603 AC089987.1-201ENST00000551654 2209 ntBASIC13.11□□□□□ -0.31
CSF1P09603 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSF1P09603 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSF1P09603 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSF1P09603 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSF1P09603 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSF1P09603 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSF1P09603 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSF1P09603 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.11□□□□□ -0.31
CSF1P09603 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.11□□□□□ -0.31
CSF1P09603 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.11□□□□□ -0.31
CSF1P09603 RBPMS2P1-201ENST00000437762 623 ntBASIC13.11□□□□□ -0.31
CSF1P09603 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.11□□□□□ -0.31
CSF1P09603 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.11□□□□□ -0.31
CSF1P09603 AL512638.1-201ENST00000457493 794 ntBASIC13.11□□□□□ -0.31
CSF1P09603 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.11□□□□□ -0.31
CSF1P09603 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.11□□□□□ -0.31
CSF1P09603 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSF1P09603 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.11□□□□□ -0.31
CSF1P09603 RNA5SP410-201ENST00000516285 106 ntBASIC13.11□□□□□ -0.31
CSF1P09603 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSF1P09603 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.11□□□□□ -0.31
CSF1P09603 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSF1P09603 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.11□□□□□ -0.31
CSF1P09603 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.11□□□□□ -0.31
CSF1P09603 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.11□□□□□ -0.31
CSF1P09603 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.11□□□□□ -0.31
CSF1P09603 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.11□□□□□ -0.31
CSF1P09603 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.11□□□□□ -0.31
CSF1P09603 AL390955.2-201ENST00000603032 514 ntBASIC13.11□□□□□ -0.31
CSF1P09603 AC026979.3-201ENST00000607315 403 ntBASIC13.11□□□□□ -0.31
CSF1P09603 AP001059.3-201ENST00000619053 235 ntBASIC13.11□□□□□ -0.31
CSF1P09603 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.11□□□□□ -0.31
CSF1P09603 AL035252.4-201ENST00000624174 288 ntBASIC13.11□□□□□ -0.31
CSF1P09603 AF228730.6-201ENST00000641497 218 ntBASIC13.11□□□□□ -0.31
CSF1P09603 AC084121.3-201ENST00000641716 218 ntBASIC13.11□□□□□ -0.31
CSF1P09603 AC105233.6-201ENST00000642093 218 ntBASIC13.11□□□□□ -0.31
CSF1P09603 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
CSF1P09603 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSF1P09603 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CSF1P09603 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSF1P09603 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.11□□□□□ -0.31
CSF1P09603 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSF1P09603 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.11□□□□□ -0.31
CSF1P09603 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CSF1P09603 AC063926.2-201ENST00000623766 1308 ntBASIC13.11□□□□□ -0.31
CSF1P09603 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSF1P09603 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSF1P09603 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSF1P09603 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSF1P09603 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.1□□□□□ -0.31
CSF1P09603 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSF1P09603 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSF1P09603 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSF1P09603 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.1□□□□□ -0.31
CSF1P09603 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSF1P09603 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms