Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.23■□□□□ 0.67
COL5A2P05997 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL5A2P05997 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
COL5A2P05997 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
COL5A2P05997 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC19.23■□□□□ 0.67
COL5A2P05997 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL5A2P05997 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC19.23■□□□□ 0.67
COL5A2P05997 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC19.23■□□□□ 0.67
COL5A2P05997 AC095040.1-201ENST00000513286 675 ntBASIC19.23■□□□□ 0.67
COL5A2P05997 AL118522.1-201ENST00000611368 560 ntBASIC19.23■□□□□ 0.67
COL5A2P05997 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC19.23■□□□□ 0.67
COL5A2P05997 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
COL5A2P05997 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL5A2P05997 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL5A2P05997 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL5A2P05997 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.23■□□□□ 0.67
COL5A2P05997 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC19.23■□□□□ 0.67
COL5A2P05997 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
COL5A2P05997 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL5A2P05997 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.23■□□□□ 0.67
COL5A2P05997 AC006504.5-208ENST00000588784 2401 ntBASIC19.23■□□□□ 0.67
COL5A2P05997 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.23■□□□□ 0.67
COL5A2P05997 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC19.23■□□□□ 0.67
COL5A2P05997 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL5A2P05997 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC19.23■□□□□ 0.67
COL5A2P05997 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC19.23■□□□□ 0.67
COL5A2P05997 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC19.23■□□□□ 0.67
COL5A2P05997 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC19.23■□□□□ 0.67
COL5A2P05997 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL5A2P05997 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL5A2P05997 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.22■□□□□ 0.67
COL5A2P05997 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
COL5A2P05997 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL5A2P05997 AC244197.1-201ENST00000456494 951 ntBASIC19.22■□□□□ 0.67
COL5A2P05997 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
COL5A2P05997 RN7SL23P-201ENST00000484055 275 ntBASIC19.22■□□□□ 0.67
COL5A2P05997 AC226150.1-201ENST00000544259 466 ntBASIC19.22■□□□□ 0.67
COL5A2P05997 PEBP1P2-201ENST00000603980 558 ntBASIC19.22■□□□□ 0.67
COL5A2P05997 AC090386.2-201ENST00000623010 1039 ntBASIC19.22■□□□□ 0.67
COL5A2P05997 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC19.22■□□□□ 0.67
COL5A2P05997 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL5A2P05997 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL5A2P05997 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC19.22■□□□□ 0.67
COL5A2P05997 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL5A2P05997 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL5A2P05997 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
COL5A2P05997 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL5A2P05997 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL5A2P05997 CTBP2P8-201ENST00000422584 1330 ntBASIC19.22■□□□□ 0.67
COL5A2P05997 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL5A2P05997 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL5A2P05997 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL5A2P05997 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL5A2P05997 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL5A2P05997 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL5A2P05997 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL5A2P05997 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL5A2P05997 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC19.22■□□□□ 0.67
COL5A2P05997 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL5A2P05997 AC021305.1-201ENST00000520656 1514 ntBASIC19.22■□□□□ 0.67
COL5A2P05997 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL5A2P05997 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
COL5A2P05997 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
COL5A2P05997 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC19.22■□□□□ 0.67
COL5A2P05997 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC19.22■□□□□ 0.67
COL5A2P05997 AC098934.1-203ENST00000442868 1262 ntBASIC19.22■□□□□ 0.67
COL5A2P05997 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC19.22■□□□□ 0.67
COL5A2P05997 RN7SL564P-201ENST00000496309 250 ntBASIC19.22■□□□□ 0.67
COL5A2P05997 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC19.22■□□□□ 0.67
COL5A2P05997 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC19.22■□□□□ 0.67
COL5A2P05997 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC19.22■□□□□ 0.67
COL5A2P05997 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC19.22■□□□□ 0.67
COL5A2P05997 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL5A2P05997 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL5A2P05997 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL5A2P05997 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL5A2P05997 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL5A2P05997 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
COL5A2P05997 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL5A2P05997 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC19.21■□□□□ 0.67
COL5A2P05997 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL5A2P05997 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL5A2P05997 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL5A2P05997 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL5A2P05997 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
COL5A2P05997 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL5A2P05997 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL5A2P05997 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL5A2P05997 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
COL5A2P05997 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL5A2P05997 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL5A2P05997 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL5A2P05997 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC19.21■□□□□ 0.67
COL5A2P05997 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
COL5A2P05997 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL5A2P05997 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC19.21■□□□□ 0.67
COL5A2P05997 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL5A2P05997 RNVU1-8-201ENST00000364272 125 ntBASIC19.21■□□□□ 0.67
COL5A2P05997 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL5A2P05997 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms