Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
APPP05067 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.11■□□□□ 0.49
APPP05067 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
APPP05067 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
APPP05067 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.11■□□□□ 0.49
APPP05067 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
APPP05067 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
APPP05067 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.11■□□□□ 0.49
APPP05067 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
APPP05067 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
APPP05067 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
APPP05067 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
APPP05067 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
APPP05067 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
APPP05067 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
APPP05067 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
APPP05067 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC18.1■□□□□ 0.49
APPP05067 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
APPP05067 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
APPP05067 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.1■□□□□ 0.49
APPP05067 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.1■□□□□ 0.49
APPP05067 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
APPP05067 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
APPP05067 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
APPP05067 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
APPP05067 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.1■□□□□ 0.49
APPP05067 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
APPP05067 ZBED1P1-201ENST00000502364 1930 ntBASIC18.1■□□□□ 0.49
APPP05067 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.1■□□□□ 0.49
APPP05067 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.1■□□□□ 0.49
APPP05067 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
APPP05067 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.1■□□□□ 0.49
APPP05067 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
APPP05067 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
APPP05067 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
APPP05067 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.1■□□□□ 0.49
APPP05067 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
APPP05067 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
APPP05067 MPV17-205ENST00000402310 906 ntTSL 5 BASIC18.1■□□□□ 0.49
APPP05067 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
APPP05067 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.1■□□□□ 0.49
APPP05067 KRT223P-202ENST00000449164 1292 ntBASIC18.1■□□□□ 0.49
APPP05067 FO681548.1-201ENST00000455617 1132 ntBASIC18.1■□□□□ 0.49
APPP05067 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.1■□□□□ 0.49
APPP05067 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.1■□□□□ 0.49
APPP05067 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
APPP05067 AP000812.2-201ENST00000538934 718 ntBASIC18.1■□□□□ 0.49
APPP05067 AC078819.1-201ENST00000547454 765 ntBASIC18.1■□□□□ 0.49
APPP05067 AC012085.1-201ENST00000548270 765 ntBASIC18.1■□□□□ 0.49
APPP05067 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.1■□□□□ 0.49
APPP05067 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.1■□□□□ 0.49
APPP05067 AP005482.1-201ENST00000563722 1273 ntBASIC18.1■□□□□ 0.49
APPP05067 DUX4L47-201ENST00000566374 394 ntBASIC18.1■□□□□ 0.49
APPP05067 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.1■□□□□ 0.49
APPP05067 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC18.1■□□□□ 0.49
APPP05067 ENPP7P14-201ENST00000621765 1040 ntBASIC18.1■□□□□ 0.49
APPP05067 AC138951.2-201ENST00000623455 1161 ntBASIC18.1■□□□□ 0.49
APPP05067 COX11-210ENST00000639671 696 ntBASIC18.1■□□□□ 0.49
APPP05067 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
APPP05067 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
APPP05067 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
APPP05067 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
APPP05067 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.1■□□□□ 0.49
APPP05067 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
APPP05067 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
APPP05067 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
APPP05067 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
APPP05067 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC18.1■□□□□ 0.49
APPP05067 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
APPP05067 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
APPP05067 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
APPP05067 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
APPP05067 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
APPP05067 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
APPP05067 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
APPP05067 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
APPP05067 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
APPP05067 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
APPP05067 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
APPP05067 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
APPP05067 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
APPP05067 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
APPP05067 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
APPP05067 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
APPP05067 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
APPP05067 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.09■□□□□ 0.49
APPP05067 CNN2P8-201ENST00000421872 913 ntBASIC18.09■□□□□ 0.49
APPP05067 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC18.09■□□□□ 0.49
APPP05067 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18.09■□□□□ 0.49
APPP05067 AC244107.1-201ENST00000442033 332 ntBASIC18.09■□□□□ 0.49
APPP05067 RN7SL48P-201ENST00000579283 293 ntBASIC18.09■□□□□ 0.49
APPP05067 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.09■□□□□ 0.49
APPP05067 AC004466.1-201ENST00000599515 1080 ntBASIC18.09■□□□□ 0.49
APPP05067 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
APPP05067 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
APPP05067 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
APPP05067 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
APPP05067 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
APPP05067 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.09■□□□□ 0.49
APPP05067 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms