Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC16.82■□□□□ 0.28
HMGCRP04035 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.82■□□□□ 0.28
HMGCRP04035 RPL17P45-201ENST00000586289 509 ntBASIC16.82■□□□□ 0.28
HMGCRP04035 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.82■□□□□ 0.28
HMGCRP04035 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.82■□□□□ 0.28
HMGCRP04035 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.82■□□□□ 0.28
HMGCRP04035 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.82■□□□□ 0.28
HMGCRP04035 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.82■□□□□ 0.28
HMGCRP04035 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCRP04035 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCRP04035 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HMGCRP04035 AP003680.1-201ENST00000598970 3660 ntBASIC16.82■□□□□ 0.28
HMGCRP04035 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCRP04035 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCRP04035 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCRP04035 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCRP04035 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCRP04035 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCRP04035 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCRP04035 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGCRP04035 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HMGCRP04035 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
HMGCRP04035 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCRP04035 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCRP04035 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HMGCRP04035 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCRP04035 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCRP04035 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.81■□□□□ 0.28
HMGCRP04035 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
HMGCRP04035 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HMGCRP04035 AL138725.1-201ENST00000407347 1314 ntBASIC16.81■□□□□ 0.28
HMGCRP04035 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCRP04035 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCRP04035 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCRP04035 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HMGCRP04035 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCRP04035 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCRP04035 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGCRP04035 AC234644.1-201ENST00000406065 370 ntBASIC16.81■□□□□ 0.28
HMGCRP04035 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC16.81■□□□□ 0.28
HMGCRP04035 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.81■□□□□ 0.28
HMGCRP04035 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.81■□□□□ 0.28
HMGCRP04035 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGCRP04035 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCRP04035 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.81■□□□□ 0.28
HMGCRP04035 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HMGCRP04035 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCRP04035 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.81■□□□□ 0.28
HMGCRP04035 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.81■□□□□ 0.28
HMGCRP04035 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC16.81■□□□□ 0.28
HMGCRP04035 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.81■□□□□ 0.28
HMGCRP04035 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
HMGCRP04035 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCRP04035 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCRP04035 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
HMGCRP04035 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCRP04035 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
HMGCRP04035 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGCRP04035 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HMGCRP04035 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCRP04035 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCRP04035 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HMGCRP04035 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HMGCRP04035 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HMGCRP04035 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGCRP04035 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HMGCRP04035 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.8■□□□□ 0.28
HMGCRP04035 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCRP04035 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCRP04035 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCRP04035 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.8■□□□□ 0.28
HMGCRP04035 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCRP04035 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCRP04035 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HMGCRP04035 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCRP04035 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGCRP04035 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCRP04035 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
HMGCRP04035 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCRP04035 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.8■□□□□ 0.28
HMGCRP04035 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
HMGCRP04035 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC16.8■□□□□ 0.28
HMGCRP04035 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGCRP04035 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCRP04035 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCRP04035 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.8■□□□□ 0.28
HMGCRP04035 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.8■□□□□ 0.28
HMGCRP04035 AP000358.1-201ENST00000456260 156 ntBASIC16.8■□□□□ 0.28
HMGCRP04035 AC018463.1-201ENST00000456674 917 ntBASIC16.8■□□□□ 0.28
HMGCRP04035 CHCHD2P9-201ENST00000461726 456 ntBASIC16.8■□□□□ 0.28
HMGCRP04035 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGCRP04035 PHBP15-201ENST00000574228 665 ntBASIC16.8■□□□□ 0.28
HMGCRP04035 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC16.8■□□□□ 0.28
HMGCRP04035 MIR6858-201ENST00000620733 67 ntBASIC16.8■□□□□ 0.28
HMGCRP04035 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCRP04035 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCRP04035 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGCRP04035 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGCRP04035 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGCRP04035 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms