Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA1P02708 AC103702.1-201ENST00000548801 2630 ntBASIC16.2■□□□□ 0.18
CHRNA1P02708 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.2■□□□□ 0.18
CHRNA1P02708 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA1P02708 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA1P02708 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA1P02708 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA1P02708 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA1P02708 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA1P02708 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CHRNA1P02708 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.2■□□□□ 0.18
CHRNA1P02708 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA1P02708 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA1P02708 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA1P02708 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA1P02708 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNA1P02708 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRNA1P02708 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRNA1P02708 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA1P02708 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA1P02708 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CHRNA1P02708 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNA1P02708 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA1P02708 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA1P02708 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CHRNA1P02708 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CHRNA1P02708 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA1P02708 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CHRNA1P02708 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CHRNA1P02708 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA1P02708 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA1P02708 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA1P02708 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA1P02708 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA1P02708 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNA1P02708 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA1P02708 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNA1P02708 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNA1P02708 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA1P02708 MIR3147-201ENST00000577811 66 ntBASIC16.19■□□□□ 0.18
CHRNA1P02708 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.19■□□□□ 0.18
CHRNA1P02708 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.19■□□□□ 0.18
CHRNA1P02708 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRNA1P02708 MIR6727-201ENST00000620702 65 ntBASIC16.19■□□□□ 0.18
CHRNA1P02708 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CHRNA1P02708 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CHRNA1P02708 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA1P02708 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRNA1P02708 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CHRNA1P02708 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA1P02708 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRNA1P02708 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA1P02708 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA1P02708 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CHRNA1P02708 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA1P02708 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRNA1P02708 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA1P02708 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRNA1P02708 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
CHRNA1P02708 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNA1P02708 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNA1P02708 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA1P02708 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA1P02708 TBC1D3J-201ENST00000620719 1426 ntBASIC16.19■□□□□ 0.18
CHRNA1P02708 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA1P02708 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA1P02708 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CHRNA1P02708 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CHRNA1P02708 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA1P02708 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA1P02708 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.18■□□□□ 0.18
CHRNA1P02708 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNA1P02708 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA1P02708 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA1P02708 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA1P02708 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA1P02708 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA1P02708 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA1P02708 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNA1P02708 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA1P02708 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA1P02708 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA1P02708 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA1P02708 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA1P02708 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA1P02708 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA1P02708 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.18■□□□□ 0.18
CHRNA1P02708 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CHRNA1P02708 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.18■□□□□ 0.18
CHRNA1P02708 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA1P02708 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.18■□□□□ 0.18
CHRNA1P02708 AC019193.1-201ENST00000506678 823 ntBASIC16.18■□□□□ 0.18
CHRNA1P02708 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNA1P02708 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.18■□□□□ 0.18
CHRNA1P02708 POU5F1P2-201ENST00000521750 823 ntBASIC16.18■□□□□ 0.18
CHRNA1P02708 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.18■□□□□ 0.18
CHRNA1P02708 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.18■□□□□ 0.18
CHRNA1P02708 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CHRNA1P02708 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CHRNA1P02708 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms