Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDGFBP01127 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDGFBP01127 AC080080.1-201ENST00000625121 2420 ntBASIC14.87□□□□□ -0.03
PDGFBP01127 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.87□□□□□ -0.03
PDGFBP01127 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PDGFBP01127 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.87□□□□□ -0.03
PDGFBP01127 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDGFBP01127 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDGFBP01127 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PDGFBP01127 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PDGFBP01127 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PDGFBP01127 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFBP01127 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.86□□□□□ -0.03
PDGFBP01127 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFBP01127 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFBP01127 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFBP01127 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.86□□□□□ -0.03
PDGFBP01127 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFBP01127 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.86□□□□□ -0.03
PDGFBP01127 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFBP01127 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.86□□□□□ -0.03
PDGFBP01127 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFBP01127 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFBP01127 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFBP01127 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
PDGFBP01127 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFBP01127 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFBP01127 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PDGFBP01127 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PDGFBP01127 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.86□□□□□ -0.03
PDGFBP01127 RPL5P21-201ENST00000404620 815 ntBASIC14.86□□□□□ -0.03
PDGFBP01127 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC14.86□□□□□ -0.03
PDGFBP01127 AC023141.7-201ENST00000430646 407 ntBASIC14.86□□□□□ -0.03
PDGFBP01127 AL512306.1-201ENST00000432698 848 ntBASIC14.86□□□□□ -0.03
PDGFBP01127 RPL35P9-201ENST00000446059 350 ntBASIC14.86□□□□□ -0.03
PDGFBP01127 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFBP01127 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.86□□□□□ -0.03
PDGFBP01127 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC14.86□□□□□ -0.03
PDGFBP01127 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC14.86□□□□□ -0.03
PDGFBP01127 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.86□□□□□ -0.03
PDGFBP01127 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC14.86□□□□□ -0.03
PDGFBP01127 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.86□□□□□ -0.03
PDGFBP01127 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
PDGFBP01127 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
PDGFBP01127 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC14.86□□□□□ -0.03
PDGFBP01127 AC007292.2-201ENST00000593524 1812 ntBASIC14.86□□□□□ -0.03
PDGFBP01127 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFBP01127 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFBP01127 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.86□□□□□ -0.03
PDGFBP01127 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.86□□□□□ -0.03
PDGFBP01127 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFBP01127 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFBP01127 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFBP01127 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.86□□□□□ -0.03
PDGFBP01127 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.86□□□□□ -0.03
PDGFBP01127 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PDGFBP01127 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFBP01127 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFBP01127 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFBP01127 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFBP01127 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFBP01127 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFBP01127 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFBP01127 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.86□□□□□ -0.03
PDGFBP01127 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFBP01127 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFBP01127 AL672207.1-201ENST00000328462 1570 ntBASIC14.85□□□□□ -0.03
PDGFBP01127 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFBP01127 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFBP01127 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFBP01127 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFBP01127 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFBP01127 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFBP01127 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PDGFBP01127 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFBP01127 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PDGFBP01127 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFBP01127 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFBP01127 SURF4-203ENST00000371991 715 ntTSL 3 BASIC14.85□□□□□ -0.03
PDGFBP01127 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC14.85□□□□□ -0.03
PDGFBP01127 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC14.85□□□□□ -0.03
PDGFBP01127 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.85□□□□□ -0.03
PDGFBP01127 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFBP01127 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC14.85□□□□□ -0.03
PDGFBP01127 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC14.85□□□□□ -0.03
PDGFBP01127 OR2R1P-201ENST00000441404 914 ntBASIC14.85□□□□□ -0.03
PDGFBP01127 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFBP01127 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC14.85□□□□□ -0.03
PDGFBP01127 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC14.85□□□□□ -0.03
PDGFBP01127 ALG3P1-201ENST00000508806 1114 ntBASIC14.85□□□□□ -0.03
PDGFBP01127 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC14.85□□□□□ -0.03
PDGFBP01127 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC14.85□□□□□ -0.03
PDGFBP01127 AP005264.6-204ENST00000588436 719 ntBASIC14.85□□□□□ -0.03
PDGFBP01127 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
PDGFBP01127 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFBP01127 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.85□□□□□ -0.03
PDGFBP01127 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PDGFBP01127 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFBP01127 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFBP01127 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms