Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ALDH1A1P00352 AP005264.6-204ENST00000588436 719 ntBASIC16.85■□□□□ 0.29
ALDH1A1P00352 HMGB1P24-201ENST00000611897 328 ntBASIC16.85■□□□□ 0.29
ALDH1A1P00352 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.85■□□□□ 0.29
ALDH1A1P00352 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ALDH1A1P00352 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ALDH1A1P00352 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ALDH1A1P00352 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ALDH1A1P00352 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ALDH1A1P00352 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ALDH1A1P00352 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ALDH1A1P00352 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
ALDH1A1P00352 MRPL37P1-201ENST00000592451 1337 ntBASIC16.85■□□□□ 0.29
ALDH1A1P00352 AC011676.5-201ENST00000624864 2660 ntBASIC16.85■□□□□ 0.29
ALDH1A1P00352 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALDH1A1P00352 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALDH1A1P00352 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALDH1A1P00352 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALDH1A1P00352 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALDH1A1P00352 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
ALDH1A1P00352 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALDH1A1P00352 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ALDH1A1P00352 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALDH1A1P00352 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ALDH1A1P00352 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALDH1A1P00352 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALDH1A1P00352 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
ALDH1A1P00352 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.85■□□□□ 0.29
ALDH1A1P00352 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ALDH1A1P00352 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
ALDH1A1P00352 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
ALDH1A1P00352 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALDH1A1P00352 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALDH1A1P00352 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.84■□□□□ 0.29
ALDH1A1P00352 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.84■□□□□ 0.29
ALDH1A1P00352 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALDH1A1P00352 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ALDH1A1P00352 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALDH1A1P00352 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALDH1A1P00352 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALDH1A1P00352 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALDH1A1P00352 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ALDH1A1P00352 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALDH1A1P00352 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
ALDH1A1P00352 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
ALDH1A1P00352 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.84■□□□□ 0.29
ALDH1A1P00352 AC073869.2-201ENST00000417338 1026 ntBASIC16.84■□□□□ 0.29
ALDH1A1P00352 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC16.84■□□□□ 0.29
ALDH1A1P00352 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.84■□□□□ 0.29
ALDH1A1P00352 GNG10P1-201ENST00000452289 199 ntBASIC16.84■□□□□ 0.29
ALDH1A1P00352 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.84■□□□□ 0.29
ALDH1A1P00352 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC16.84■□□□□ 0.29
ALDH1A1P00352 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.84■□□□□ 0.29
ALDH1A1P00352 AC226150.1-201ENST00000544259 466 ntBASIC16.84■□□□□ 0.29
ALDH1A1P00352 AC068867.1-201ENST00000559855 150 ntBASIC16.84■□□□□ 0.29
ALDH1A1P00352 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ALDH1A1P00352 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.84■□□□□ 0.29
ALDH1A1P00352 AL589935.2-201ENST00000616471 1231 ntBASIC16.84■□□□□ 0.29
ALDH1A1P00352 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
ALDH1A1P00352 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
ALDH1A1P00352 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALDH1A1P00352 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ALDH1A1P00352 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC16.84■□□□□ 0.29
ALDH1A1P00352 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.84■□□□□ 0.29
ALDH1A1P00352 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.84■□□□□ 0.29
ALDH1A1P00352 AC012313.1-201ENST00000593393 3059 ntBASIC16.84■□□□□ 0.29
ALDH1A1P00352 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ALDH1A1P00352 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.84■□□□□ 0.29
ALDH1A1P00352 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALDH1A1P00352 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALDH1A1P00352 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALDH1A1P00352 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
ALDH1A1P00352 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.84■□□□□ 0.29
ALDH1A1P00352 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.84■□□□□ 0.29
ALDH1A1P00352 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALDH1A1P00352 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ALDH1A1P00352 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
ALDH1A1P00352 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ALDH1A1P00352 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
ALDH1A1P00352 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ALDH1A1P00352 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ALDH1A1P00352 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALDH1A1P00352 AL672207.1-201ENST00000328462 1570 ntBASIC16.83■□□□□ 0.28
ALDH1A1P00352 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALDH1A1P00352 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALDH1A1P00352 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ALDH1A1P00352 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ALDH1A1P00352 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALDH1A1P00352 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC16.83■□□□□ 0.28
ALDH1A1P00352 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALDH1A1P00352 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ALDH1A1P00352 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC16.83■□□□□ 0.28
ALDH1A1P00352 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ALDH1A1P00352 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC16.83■□□□□ 0.28
ALDH1A1P00352 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ALDH1A1P00352 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ALDH1A1P00352 LILRP1-201ENST00000444199 1370 ntBASIC16.83■□□□□ 0.28
ALDH1A1P00352 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC16.83■□□□□ 0.28
ALDH1A1P00352 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC16.83■□□□□ 0.28
ALDH1A1P00352 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms