Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH8O95206 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDH8O95206 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH8O95206 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.03■□□□□ -0
PCDH8O95206 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.03■□□□□ -0
PCDH8O95206 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.03■□□□□ -0
PCDH8O95206 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDH8O95206 HIST2H2BB-201ENST00000449108 381 ntBASIC15.03■□□□□ -0
PCDH8O95206 KRT8P13-201ENST00000463294 1010 ntBASIC15.03■□□□□ -0
PCDH8O95206 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDH8O95206 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.03■□□□□ -0
PCDH8O95206 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.03■□□□□ -0
PCDH8O95206 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.03■□□□□ -0
PCDH8O95206 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.03■□□□□ -0
PCDH8O95206 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDH8O95206 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PCDH8O95206 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH8O95206 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.03■□□□□ -0
PCDH8O95206 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH8O95206 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDH8O95206 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDH8O95206 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH8O95206 AC103702.1-201ENST00000548801 2630 ntBASIC15.03■□□□□ -0
PCDH8O95206 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PCDH8O95206 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PCDH8O95206 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDH8O95206 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
PCDH8O95206 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH8O95206 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.03■□□□□ -0
PCDH8O95206 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH8O95206 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
PCDH8O95206 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDH8O95206 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDH8O95206 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH8O95206 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.02■□□□□ -0
PCDH8O95206 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH8O95206 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.02■□□□□ -0
PCDH8O95206 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.02■□□□□ -0
PCDH8O95206 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH8O95206 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.02■□□□□ -0
PCDH8O95206 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
PCDH8O95206 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDH8O95206 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH8O95206 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
PCDH8O95206 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.02■□□□□ -0
PCDH8O95206 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH8O95206 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.02■□□□□ -0
PCDH8O95206 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH8O95206 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PCDH8O95206 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH8O95206 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
PCDH8O95206 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH8O95206 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH8O95206 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH8O95206 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH8O95206 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
PCDH8O95206 AL136309.1-201ENST00000403917 691 ntBASIC15.02■□□□□ -0
PCDH8O95206 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.02■□□□□ -0
PCDH8O95206 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.02□□□□□ -0.01
PCDH8O95206 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.02□□□□□ -0.01
PCDH8O95206 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.02□□□□□ -0.01
PCDH8O95206 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDH8O95206 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
PCDH8O95206 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDH8O95206 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDH8O95206 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PCDH8O95206 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDH8O95206 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.02□□□□□ -0.01
PCDH8O95206 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDH8O95206 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
PCDH8O95206 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDH8O95206 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDH8O95206 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PCDH8O95206 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.02□□□□□ -0.01
PCDH8O95206 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.02□□□□□ -0.01
PCDH8O95206 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.02□□□□□ -0.01
PCDH8O95206 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.02□□□□□ -0.01
PCDH8O95206 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDH8O95206 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.02□□□□□ -0.01
PCDH8O95206 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.02□□□□□ -0.01
PCDH8O95206 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.02□□□□□ -0.01
PCDH8O95206 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDH8O95206 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PCDH8O95206 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDH8O95206 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PCDH8O95206 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH8O95206 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.01□□□□□ -0.01
PCDH8O95206 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH8O95206 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDH8O95206 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH8O95206 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDH8O95206 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDH8O95206 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.01□□□□□ -0.01
PCDH8O95206 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH8O95206 WASH3P-207ENST00000560956 1394 ntBASIC15.01□□□□□ -0.01
PCDH8O95206 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.01□□□□□ -0.01
PCDH8O95206 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH8O95206 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDH8O95206 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.01□□□□□ -0.01
PCDH8O95206 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms