Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL5O76039 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL5O76039 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL5O76039 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDKL5O76039 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL5O76039 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL5O76039 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL5O76039 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL5O76039 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.5■□□□□ 0.39
CDKL5O76039 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.5■□□□□ 0.39
CDKL5O76039 AC007969.1-201ENST00000433675 447 ntBASIC17.5■□□□□ 0.39
CDKL5O76039 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL5O76039 RN7SL752P-201ENST00000463779 287 ntBASIC17.5■□□□□ 0.39
CDKL5O76039 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CDKL5O76039 AC068587.3-201ENST00000526613 355 ntBASIC17.5■□□□□ 0.39
CDKL5O76039 TDH-203ENST00000531764 1110 ntBASIC17.5■□□□□ 0.39
CDKL5O76039 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
CDKL5O76039 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.5■□□□□ 0.39
CDKL5O76039 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.5■□□□□ 0.39
CDKL5O76039 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.5■□□□□ 0.39
CDKL5O76039 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL5O76039 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.5■□□□□ 0.39
CDKL5O76039 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL5O76039 AC025048.6-201ENST00000634326 1161 ntBASIC17.5■□□□□ 0.39
CDKL5O76039 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CDKL5O76039 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.5■□□□□ 0.39
CDKL5O76039 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL5O76039 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC17.5■□□□□ 0.39
CDKL5O76039 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL5O76039 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL5O76039 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDKL5O76039 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
CDKL5O76039 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL5O76039 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL5O76039 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL5O76039 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.5■□□□□ 0.39
CDKL5O76039 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL5O76039 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL5O76039 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL5O76039 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL5O76039 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.49■□□□□ 0.39
CDKL5O76039 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CDKL5O76039 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CDKL5O76039 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.49■□□□□ 0.39
CDKL5O76039 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.49■□□□□ 0.39
CDKL5O76039 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.49■□□□□ 0.39
CDKL5O76039 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
CDKL5O76039 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL5O76039 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CDKL5O76039 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL5O76039 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL5O76039 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CDKL5O76039 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CDKL5O76039 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL5O76039 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CDKL5O76039 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL5O76039 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL5O76039 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.49■□□□□ 0.39
CDKL5O76039 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.49■□□□□ 0.39
CDKL5O76039 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.49■□□□□ 0.39
CDKL5O76039 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CDKL5O76039 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.49■□□□□ 0.39
CDKL5O76039 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CDKL5O76039 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CDKL5O76039 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL5O76039 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.49■□□□□ 0.39
CDKL5O76039 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CDKL5O76039 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL5O76039 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
CDKL5O76039 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CDKL5O76039 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CDKL5O76039 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL5O76039 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL5O76039 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL5O76039 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CDKL5O76039 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL5O76039 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL5O76039 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL5O76039 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CDKL5O76039 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL5O76039 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.48■□□□□ 0.39
CDKL5O76039 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CDKL5O76039 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL5O76039 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL5O76039 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL5O76039 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL5O76039 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL5O76039 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL5O76039 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL5O76039 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.48■□□□□ 0.39
CDKL5O76039 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL5O76039 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL5O76039 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.48■□□□□ 0.39
CDKL5O76039 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL5O76039 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL5O76039 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.48■□□□□ 0.39
CDKL5O76039 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL5O76039 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
CDKL5O76039 AL358472.5-202ENST00000641448 1267 ntBASIC17.48■□□□□ 0.39
CDKL5O76039 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms