Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 NPTN-IT1-201ENST00000628401 2283 ntBASIC13.09□□□□□ -0.31
CCNKO75909 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CCNKO75909 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
CCNKO75909 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CCNKO75909 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.08□□□□□ -0.31
CCNKO75909 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
CCNKO75909 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CCNKO75909 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CCNKO75909 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CCNKO75909 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
CCNKO75909 AC015819.3-201ENST00000624305 2674 ntBASIC13.08□□□□□ -0.31
CCNKO75909 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC13.08□□□□□ -0.31
CCNKO75909 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCNKO75909 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.32
CCNKO75909 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCNKO75909 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC13.08□□□□□ -0.32
CCNKO75909 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCNKO75909 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCNKO75909 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.08□□□□□ -0.32
CCNKO75909 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.08□□□□□ -0.32
CCNKO75909 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCNKO75909 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCNKO75909 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CCNKO75909 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCNKO75909 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCNKO75909 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCNKO75909 AL031133.1-201ENST00000406807 723 ntBASIC13.08□□□□□ -0.32
CCNKO75909 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.08□□□□□ -0.32
CCNKO75909 AC107918.2-201ENST00000530817 355 ntBASIC13.08□□□□□ -0.32
CCNKO75909 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.08□□□□□ -0.32
CCNKO75909 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.08□□□□□ -0.32
CCNKO75909 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.08□□□□□ -0.32
CCNKO75909 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCNKO75909 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.08□□□□□ -0.32
CCNKO75909 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.08□□□□□ -0.32
CCNKO75909 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCNKO75909 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CCNKO75909 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CCNKO75909 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCNKO75909 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CCNKO75909 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.08□□□□□ -0.32
CCNKO75909 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCNKO75909 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
CCNKO75909 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.08□□□□□ -0.32
CCNKO75909 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCNKO75909 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCNKO75909 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCNKO75909 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CCNKO75909 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCNKO75909 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCNKO75909 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CCNKO75909 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CCNKO75909 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.07□□□□□ -0.32
CCNKO75909 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.07□□□□□ -0.32
CCNKO75909 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CCNKO75909 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CCNKO75909 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC13.07□□□□□ -0.32
CCNKO75909 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CCNKO75909 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
CCNKO75909 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 PTCHD3P3-201ENST00000403073 906 ntBASIC13.07□□□□□ -0.32
CCNKO75909 HCG4-201ENST00000418983 998 ntBASIC13.07□□□□□ -0.32
CCNKO75909 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.07□□□□□ -0.32
CCNKO75909 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.07□□□□□ -0.32
CCNKO75909 AP000867.3-201ENST00000524675 377 ntBASIC13.07□□□□□ -0.32
CCNKO75909 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.07□□□□□ -0.32
CCNKO75909 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.07□□□□□ -0.32
CCNKO75909 RN7SL850P-201ENST00000579959 291 ntBASIC13.07□□□□□ -0.32
CCNKO75909 NKAPP1-205ENST00000585790 367 ntBASIC13.07□□□□□ -0.32
CCNKO75909 AC099336.1-202ENST00000602961 463 ntBASIC13.07□□□□□ -0.32
CCNKO75909 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.07□□□□□ -0.32
CCNKO75909 AL022326.1-202ENST00000641533 845 ntBASIC13.07□□□□□ -0.32
CCNKO75909 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC13.07□□□□□ -0.32
CCNKO75909 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms