Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCMT2O60294 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCMT2O60294 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCMT2O60294 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCMT2O60294 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCMT2O60294 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LCMT2O60294 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCMT2O60294 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LCMT2O60294 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LCMT2O60294 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCMT2O60294 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LCMT2O60294 INE2-201ENST00000630399 1874 ntBASIC14.4□□□□□ -0.1
LCMT2O60294 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LCMT2O60294 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.4□□□□□ -0.11
LCMT2O60294 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.39□□□□□ -0.11
LCMT2O60294 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LCMT2O60294 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.39□□□□□ -0.11
LCMT2O60294 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LCMT2O60294 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.39□□□□□ -0.11
LCMT2O60294 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LCMT2O60294 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LCMT2O60294 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LCMT2O60294 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LCMT2O60294 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LCMT2O60294 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LCMT2O60294 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.39□□□□□ -0.11
LCMT2O60294 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LCMT2O60294 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LCMT2O60294 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LCMT2O60294 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LCMT2O60294 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LCMT2O60294 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.39□□□□□ -0.11
LCMT2O60294 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LCMT2O60294 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LCMT2O60294 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LCMT2O60294 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LCMT2O60294 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.39□□□□□ -0.11
LCMT2O60294 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.39□□□□□ -0.11
LCMT2O60294 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LCMT2O60294 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.39□□□□□ -0.11
LCMT2O60294 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.39□□□□□ -0.11
LCMT2O60294 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.39□□□□□ -0.11
LCMT2O60294 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.39□□□□□ -0.11
LCMT2O60294 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.39□□□□□ -0.11
LCMT2O60294 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
LCMT2O60294 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
LCMT2O60294 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.39□□□□□ -0.11
LCMT2O60294 MESTP3-201ENST00000503460 968 ntBASIC14.39□□□□□ -0.11
LCMT2O60294 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.39□□□□□ -0.11
LCMT2O60294 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LCMT2O60294 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LCMT2O60294 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LCMT2O60294 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LCMT2O60294 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LCMT2O60294 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.39□□□□□ -0.11
LCMT2O60294 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.39□□□□□ -0.11
LCMT2O60294 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LCMT2O60294 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
LCMT2O60294 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
LCMT2O60294 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LCMT2O60294 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LCMT2O60294 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
LCMT2O60294 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
LCMT2O60294 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LCMT2O60294 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.39□□□□□ -0.11
LCMT2O60294 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LCMT2O60294 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LCMT2O60294 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
LCMT2O60294 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
LCMT2O60294 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
LCMT2O60294 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.38□□□□□ -0.11
LCMT2O60294 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
LCMT2O60294 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.38□□□□□ -0.11
LCMT2O60294 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LCMT2O60294 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.38□□□□□ -0.11
LCMT2O60294 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.38□□□□□ -0.11
LCMT2O60294 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
LCMT2O60294 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
LCMT2O60294 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
LCMT2O60294 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.38□□□□□ -0.11
LCMT2O60294 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
LCMT2O60294 ACA64.2-201ENST00000459014 129 ntBASIC14.38□□□□□ -0.11
LCMT2O60294 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms