Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
PAX4O43316 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PAX4O43316 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
PAX4O43316 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
PAX4O43316 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
PAX4O43316 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
PAX4O43316 CICP11-201ENST00000434745 2827 ntBASIC10.87□□□□□ -0.67
PAX4O43316 KRT8P44-201ENST00000441609 1350 ntBASIC10.87□□□□□ -0.67
PAX4O43316 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
PAX4O43316 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
PAX4O43316 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC10.87□□□□□ -0.67
PAX4O43316 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PAX4O43316 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PAX4O43316 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
PAX4O43316 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PAX4O43316 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PAX4O43316 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PAX4O43316 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC10.87□□□□□ -0.67
PAX4O43316 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC10.87□□□□□ -0.67
PAX4O43316 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
PAX4O43316 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PAX4O43316 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC10.87□□□□□ -0.67
PAX4O43316 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC10.87□□□□□ -0.67
PAX4O43316 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PAX4O43316 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PAX4O43316 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PAX4O43316 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC10.86□□□□□ -0.67
PAX4O43316 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PAX4O43316 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC10.86□□□□□ -0.67
PAX4O43316 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PAX4O43316 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PAX4O43316 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PAX4O43316 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC10.86□□□□□ -0.67
PAX4O43316 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PAX4O43316 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PAX4O43316 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC10.86□□□□□ -0.67
PAX4O43316 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PAX4O43316 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PAX4O43316 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PAX4O43316 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PAX4O43316 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC10.86□□□□□ -0.67
PAX4O43316 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
PAX4O43316 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
PAX4O43316 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC10.86□□□□□ -0.67
PAX4O43316 SMIM11A-201ENST00000399292 850 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PAX4O43316 PIN1P1-201ENST00000412108 996 ntBASIC10.86□□□□□ -0.67
PAX4O43316 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC10.86□□□□□ -0.67
PAX4O43316 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC10.86□□□□□ -0.67
PAX4O43316 AC004066.1-201ENST00000502488 802 ntBASIC10.86□□□□□ -0.67
PAX4O43316 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC10.86□□□□□ -0.67
PAX4O43316 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC10.86□□□□□ -0.67
PAX4O43316 AC123567.1-201ENST00000548294 1261 ntBASIC10.86□□□□□ -0.67
PAX4O43316 CDK4-206ENST00000549606 558 ntTSL 2 BASIC10.86□□□□□ -0.67
PAX4O43316 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC10.86□□□□□ -0.67
PAX4O43316 GREM1-201ENST00000560677 623 ntTSL 4 BASIC10.86□□□□□ -0.67
PAX4O43316 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC10.86□□□□□ -0.67
PAX4O43316 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC10.86□□□□□ -0.67
PAX4O43316 RN7SL440P-201ENST00000577855 343 ntBASIC10.86□□□□□ -0.67
PAX4O43316 GPX4-206ENST00000588919 803 ntTSL 2 BASIC10.86□□□□□ -0.67
PAX4O43316 AL049840.4-201ENST00000602422 811 ntBASIC10.86□□□□□ -0.67
PAX4O43316 AC099568.2-201ENST00000609194 695 ntBASIC10.86□□□□□ -0.67
PAX4O43316 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PAX4O43316 AC107308.1-201ENST00000615897 301 ntBASIC10.86□□□□□ -0.67
PAX4O43316 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC10.86□□□□□ -0.67
PAX4O43316 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC10.86□□□□□ -0.67
PAX4O43316 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC10.86□□□□□ -0.67
PAX4O43316 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
PAX4O43316 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PAX4O43316 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PAX4O43316 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
PAX4O43316 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PAX4O43316 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
PAX4O43316 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC10.86□□□□□ -0.67
PAX4O43316 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PAX4O43316 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC10.86□□□□□ -0.67
PAX4O43316 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
PAX4O43316 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PAX4O43316 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PAX4O43316 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC10.86□□□□□ -0.67
PAX4O43316 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
PAX4O43316 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC10.85□□□□□ -0.67
PAX4O43316 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC10.85□□□□□ -0.67
PAX4O43316 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
PAX4O43316 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PAX4O43316 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PAX4O43316 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC10.85□□□□□ -0.67
PAX4O43316 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
PAX4O43316 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
PAX4O43316 RN7SL832P-201ENST00000607781 1756 ntBASIC10.85□□□□□ -0.67
PAX4O43316 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PAX4O43316 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PAX4O43316 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
PAX4O43316 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PAX4O43316 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC10.85□□□□□ -0.67
PAX4O43316 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PAX4O43316 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PAX4O43316 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
PAX4O43316 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
PAX4O43316 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
PAX4O43316 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms