Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
AP3B1O00203 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3B1O00203 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.25■□□□□ 0.03
AP3B1O00203 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP3B1O00203 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
AP3B1O00203 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.25■□□□□ 0.03
AP3B1O00203 AC104581.4-201ENST00000623126 3052 ntBASIC15.25■□□□□ 0.03
AP3B1O00203 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3B1O00203 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP3B1O00203 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3B1O00203 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.25■□□□□ 0.03
AP3B1O00203 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3B1O00203 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.25■□□□□ 0.03
AP3B1O00203 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
AP3B1O00203 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP3B1O00203 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.25■□□□□ 0.03
AP3B1O00203 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
AP3B1O00203 FAM207CP-201ENST00000443486 507 ntBASIC15.25■□□□□ 0.03
AP3B1O00203 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP3B1O00203 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.25■□□□□ 0.03
AP3B1O00203 SPDYE22P-201ENST00000582158 798 ntBASIC15.25■□□□□ 0.03
AP3B1O00203 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.25■□□□□ 0.03
AP3B1O00203 AC008761.3-201ENST00000624803 892 ntBASIC15.25■□□□□ 0.03
AP3B1O00203 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.25■□□□□ 0.03
AP3B1O00203 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3B1O00203 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP3B1O00203 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.25■□□□□ 0.03
AP3B1O00203 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.25■□□□□ 0.03
AP3B1O00203 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.25■□□□□ 0.03
AP3B1O00203 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3B1O00203 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP3B1O00203 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
AP3B1O00203 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3B1O00203 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3B1O00203 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
AP3B1O00203 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
AP3B1O00203 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP3B1O00203 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.25■□□□□ 0.03
AP3B1O00203 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3B1O00203 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.25■□□□□ 0.03
AP3B1O00203 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3B1O00203 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3B1O00203 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
AP3B1O00203 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3B1O00203 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.24■□□□□ 0.03
AP3B1O00203 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
AP3B1O00203 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3B1O00203 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP3B1O00203 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
AP3B1O00203 LRRC59-203ENST00000576448 1531 ntBASIC15.24■□□□□ 0.03
AP3B1O00203 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
AP3B1O00203 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
AP3B1O00203 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3B1O00203 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
AP3B1O00203 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3B1O00203 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.24■□□□□ 0.03
AP3B1O00203 KLF2P2-201ENST00000416807 1039 ntBASIC15.24■□□□□ 0.03
AP3B1O00203 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.24■□□□□ 0.03
AP3B1O00203 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
AP3B1O00203 KRT18P25-201ENST00000508931 1278 ntBASIC15.24■□□□□ 0.03
AP3B1O00203 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.24■□□□□ 0.03
AP3B1O00203 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.24■□□□□ 0.03
AP3B1O00203 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.24■□□□□ 0.03
AP3B1O00203 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3B1O00203 AC004233.3-201ENST00000607794 1269 ntBASIC15.24■□□□□ 0.03
AP3B1O00203 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
AP3B1O00203 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.24■□□□□ 0.03
AP3B1O00203 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP3B1O00203 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3B1O00203 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3B1O00203 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.24■□□□□ 0.03
AP3B1O00203 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3B1O00203 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3B1O00203 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.24■□□□□ 0.03
AP3B1O00203 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP3B1O00203 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.24■□□□□ 0.03
AP3B1O00203 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.24■□□□□ 0.03
AP3B1O00203 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3B1O00203 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3B1O00203 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.23■□□□□ 0.03
AP3B1O00203 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3B1O00203 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
AP3B1O00203 BX640514.1-201ENST00000583223 1918 ntBASIC15.23■□□□□ 0.03
AP3B1O00203 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3B1O00203 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.23■□□□□ 0.03
AP3B1O00203 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3B1O00203 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.23■□□□□ 0.03
AP3B1O00203 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP3B1O00203 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.23■□□□□ 0.03
AP3B1O00203 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3B1O00203 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.23■□□□□ 0.03
AP3B1O00203 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.23■□□□□ 0.03
AP3B1O00203 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
AP3B1O00203 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP3B1O00203 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.23■□□□□ 0.03
AP3B1O00203 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.23■□□□□ 0.03
AP3B1O00203 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP3B1O00203 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP3B1O00203 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3B1O00203 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms