Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SRRM4A7MD48 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SRRM4A7MD48 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SRRM4A7MD48 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
SRRM4A7MD48 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SRRM4A7MD48 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SRRM4A7MD48 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.14□□□□□ -0.47
SRRM4A7MD48 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.14□□□□□ -0.47
SRRM4A7MD48 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.14□□□□□ -0.47
SRRM4A7MD48 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.14□□□□□ -0.47
SRRM4A7MD48 OR2I1P-209ENST00000641730 5365 ntBASIC12.14□□□□□ -0.47
SRRM4A7MD48 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.14□□□□□ -0.47
SRRM4A7MD48 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.14□□□□□ -0.47
SRRM4A7MD48 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 RNU1-114P-201ENST00000365297 166 ntBASIC12.14□□□□□ -0.47
SRRM4A7MD48 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.14□□□□□ -0.47
SRRM4A7MD48 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
SRRM4A7MD48 MIR661-201ENST00000384842 89 ntBASIC12.14□□□□□ -0.47
SRRM4A7MD48 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.14□□□□□ -0.47
SRRM4A7MD48 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.14□□□□□ -0.47
SRRM4A7MD48 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.14□□□□□ -0.47
SRRM4A7MD48 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.14□□□□□ -0.47
SRRM4A7MD48 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.14□□□□□ -0.47
SRRM4A7MD48 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.14□□□□□ -0.47
SRRM4A7MD48 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.14□□□□□ -0.47
SRRM4A7MD48 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.14□□□□□ -0.47
SRRM4A7MD48 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SRRM4A7MD48 AL132655.2-201ENST00000596276 594 ntBASIC12.14□□□□□ -0.47
SRRM4A7MD48 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.14□□□□□ -0.47
SRRM4A7MD48 TMEM261P1-201ENST00000604899 340 ntBASIC12.14□□□□□ -0.47
SRRM4A7MD48 AJ011932.1-201ENST00000621707 465 ntBASIC12.14□□□□□ -0.47
SRRM4A7MD48 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SRRM4A7MD48 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.14□□□□□ -0.47
SRRM4A7MD48 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.14□□□□□ -0.47
SRRM4A7MD48 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.14□□□□□ -0.47
SRRM4A7MD48 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SRRM4A7MD48 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.14□□□□□ -0.47
SRRM4A7MD48 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.14□□□□□ -0.47
SRRM4A7MD48 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.14□□□□□ -0.47
SRRM4A7MD48 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SRRM4A7MD48 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SRRM4A7MD48 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRRM4A7MD48 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SRRM4A7MD48 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRRM4A7MD48 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SRRM4A7MD48 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRRM4A7MD48 AC027601.5-201ENST00000624065 2482 ntBASIC12.13□□□□□ -0.47
SRRM4A7MD48 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SRRM4A7MD48 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRRM4A7MD48 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRRM4A7MD48 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRRM4A7MD48 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 AL354702.1-201ENST00000442006 1960 ntBASIC12.13□□□□□ -0.47
SRRM4A7MD48 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRRM4A7MD48 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRRM4A7MD48 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SRRM4A7MD48 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRRM4A7MD48 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRRM4A7MD48 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SRRM4A7MD48 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms