Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 AGGF1P2-201ENST00000426656 2106 ntBASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 RNVU1-8-201ENST00000364272 125 ntBASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 AC027612.2-202ENST00000445955 1199 ntBASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 AC131206.1-201ENST00000538078 1211 ntBASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM88BA6NKF7 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 LTB4R2-202ENST00000528054 3092 ntBASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 RPL14-203ENST00000416518 812 ntTSL 3 BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 ASS1P2-201ENST00000439895 1223 ntBASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TMEM88BA6NKF7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 AL513523.2-202ENST00000427283 2040 ntBASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 AL512599.1-201ENST00000430724 685 ntBASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 EEF1DP5-201ENST00000431410 772 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms