Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 AC007686.3-201ENST00000619017 3487 ntBASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 AC006001.1-201ENST00000325130 474 ntBASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 AC026954.1-201ENST00000429771 1293 ntBASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 AC244107.1-201ENST00000442033 332 ntBASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 RHOXF1P1-202ENST00000635473 501 ntBASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 AC006453.4-201ENST00000636949 1252 ntBASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 CICP24-201ENST00000605464 2705 ntBASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PCDHGC4Q9Y5F7 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 INE2-201ENST00000630399 1874 ntBASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 MIR1202-201ENST00000408529 83 ntBASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 AC138466.3-201ENST00000619983 221 ntBASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms