Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 AC010328.2-201ENST00000597698 1111 ntBASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 AC244669.2-201ENST00000612320 853 ntBASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 AC134312.5-201ENST00000568031 1313 ntBASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 AL596257.1-201ENST00000641463 2694 ntBASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 AC026954.1-201ENST00000429771 1293 ntBASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 AC012441.1-201ENST00000446669 685 ntBASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 PFN1P12-201ENST00000455938 534 ntBASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 AC243960.2-201ENST00000600996 747 ntBASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 AC005252.2-201ENST00000624630 1141 ntBASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
FNDC3AQ9Y2H6 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 AC067750.1-201ENST00000608826 6545 ntBASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 AC016694.1-201ENST00000434179 700 ntBASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 AC000095.1-201ENST00000603208 874 ntBASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 AL589935.2-201ENST00000616471 1231 ntBASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 AC023157.3-201ENST00000619086 2088 ntBASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 AC006486.2-201ENST00000624246 2199 ntBASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
FNDC3AQ9Y2H6 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms