Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SCN11AQ9UI33 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC18.83■□□□□ 0.6
SCN11AQ9UI33 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SCN11AQ9UI33 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SCN11AQ9UI33 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
SCN11AQ9UI33 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN11AQ9UI33 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SCN11AQ9UI33 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC18.83■□□□□ 0.6
SCN11AQ9UI33 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 AL354702.1-201ENST00000442006 1960 ntBASIC18.82■□□□□ 0.6
SCN11AQ9UI33 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN11AQ9UI33 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 AJ011931.1-201ENST00000618749 2492 ntBASIC18.81■□□□□ 0.6
SCN11AQ9UI33 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 MIR645-201ENST00000385283 94 ntBASIC18.81■□□□□ 0.6
SCN11AQ9UI33 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 MIR4649-201ENST00000582839 64 ntBASIC18.81■□□□□ 0.6
SCN11AQ9UI33 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 AC073347.1-201ENST00000421633 2643 ntBASIC18.81■□□□□ 0.6
SCN11AQ9UI33 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCN11AQ9UI33 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SCN11AQ9UI33 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCN11AQ9UI33 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN11AQ9UI33 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC18.8■□□□□ 0.6
SCN11AQ9UI33 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
SCN11AQ9UI33 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN11AQ9UI33 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC18.8■□□□□ 0.6
SCN11AQ9UI33 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.8■□□□□ 0.6
SCN11AQ9UI33 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCN11AQ9UI33 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN11AQ9UI33 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN11AQ9UI33 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN11AQ9UI33 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN11AQ9UI33 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN11AQ9UI33 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCN11AQ9UI33 AL357563.1-201ENST00000404728 395 ntBASIC18.8■□□□□ 0.6
SCN11AQ9UI33 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC18.8■□□□□ 0.6
SCN11AQ9UI33 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC18.8■□□□□ 0.6
SCN11AQ9UI33 AL161932.2-201ENST00000435436 679 ntBASIC18.8■□□□□ 0.6
SCN11AQ9UI33 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC18.8■□□□□ 0.6
SCN11AQ9UI33 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC18.8■□□□□ 0.6
SCN11AQ9UI33 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC18.8■□□□□ 0.6
SCN11AQ9UI33 AC007326.1-201ENST00000604539 458 ntBASIC18.8■□□□□ 0.6
SCN11AQ9UI33 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN11AQ9UI33 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms