Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 AC007541.1-201ENST00000570282 1469 ntBASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 SLC7A15P-201ENST00000424028 1363 ntBASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 CALY-202ENST00000368555 783 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 AL645937.2-201ENST00000396808 931 ntBASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 AL442647.2-201ENST00000429864 857 ntBASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 RN7SL399P-201ENST00000471648 279 ntBASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 FAM86LP-201ENST00000478302 853 ntBASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 AC004066.1-201ENST00000502488 802 ntBASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 LINC02560-201ENST00000596379 459 ntBASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 AL158212.4-201ENST00000624062 1286 ntBASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 AC004840.1-201ENST00000636359 365 ntBASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 TPO-203ENST00000346956 2923 ntTSL 5 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 TNN-203ENST00000622870 3719 ntTSL 5 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 AC090616.6-203ENST00000579186 1945 ntBASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00474Q9P2X8 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00474Q9P2X8 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00474Q9P2X8 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00474Q9P2X8 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
LINC00474Q9P2X8 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
LINC00474Q9P2X8 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00474Q9P2X8 FP325330.2-201ENST00000624219 5630 ntBASIC9.92□□□□□ -0.82
LINC00474Q9P2X8 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC9.92□□□□□ -0.82
LINC00474Q9P2X8 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00474Q9P2X8 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms