Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.27□□□□□ -0.13
VAPAQ9P0L0 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.27□□□□□ -0.13
VAPAQ9P0L0 SNHG9-202ENST00000564014 471 ntBASIC14.27□□□□□ -0.13
VAPAQ9P0L0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
VAPAQ9P0L0 AL596442.2-201ENST00000610240 980 ntBASIC14.27□□□□□ -0.13
VAPAQ9P0L0 AC134684.3-201ENST00000641758 218 ntBASIC14.27□□□□□ -0.13
VAPAQ9P0L0 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
VAPAQ9P0L0 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VAPAQ9P0L0 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
VAPAQ9P0L0 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.27□□□□□ -0.13
VAPAQ9P0L0 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VAPAQ9P0L0 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.27□□□□□ -0.13
VAPAQ9P0L0 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.27□□□□□ -0.13
VAPAQ9P0L0 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VAPAQ9P0L0 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VAPAQ9P0L0 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
VAPAQ9P0L0 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VAPAQ9P0L0 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.26□□□□□ -0.13
VAPAQ9P0L0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 TSEN15P1-201ENST00000423257 515 ntBASIC14.26□□□□□ -0.13
VAPAQ9P0L0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.26□□□□□ -0.13
VAPAQ9P0L0 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 MEIS3P1-201ENST00000495167 958 ntBASIC14.26□□□□□ -0.13
VAPAQ9P0L0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 AC140878.1-201ENST00000565277 250 ntBASIC14.26□□□□□ -0.13
VAPAQ9P0L0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 AC012617.1-204ENST00000586340 2305 ntBASIC14.26□□□□□ -0.13
VAPAQ9P0L0 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 AC089987.1-201ENST00000551654 2209 ntBASIC14.26□□□□□ -0.13
VAPAQ9P0L0 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 AC079781.5-202ENST00000641784 3743 ntBASIC14.26□□□□□ -0.13
VAPAQ9P0L0 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
VAPAQ9P0L0 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 AC016397.2-201ENST00000624848 1985 ntBASIC14.25□□□□□ -0.13
VAPAQ9P0L0 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 AC100757.3-201ENST00000622361 1406 ntBASIC14.25□□□□□ -0.13
VAPAQ9P0L0 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 KRT18P13-201ENST00000400056 1290 ntBASIC14.25□□□□□ -0.13
VAPAQ9P0L0 AC107890.1-201ENST00000422478 521 ntBASIC14.25□□□□□ -0.13
VAPAQ9P0L0 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 AL589987.1-201ENST00000453380 819 ntBASIC14.25□□□□□ -0.13
VAPAQ9P0L0 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 AC107373.2-201ENST00000607735 490 ntBASIC14.25□□□□□ -0.13
VAPAQ9P0L0 AL590560.3-201ENST00000623350 461 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms