Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 AC136621.1-201ENST00000624017 2304 ntBASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 SSR4P1-203ENST00000599569 2260 ntBASIC17.07■□□□□ 0.32
HOXC10Q9NYD6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 KRT8P21-201ENST00000430398 1491 ntBASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 AC006480.2-201ENST00000609770 1337 ntBASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 AC073150.1-201ENST00000450406 1084 ntBASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 CEP164P1-201ENST00000455142 418 ntBASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 RN7SL258P-201ENST00000478664 300 ntBASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 AC116345.2-201ENST00000512837 523 ntBASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 MIR4754-201ENST00000582477 89 ntBASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 NAT9-224ENST00000583757 583 ntTSL 3 BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 AL513477.1-201ENST00000602865 2407 ntBASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXC10Q9NYD6 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 AC007292.2-201ENST00000593524 1812 ntBASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 AC026316.1-201ENST00000398900 414 ntBASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 AL645933.1-201ENST00000440087 609 ntBASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms