Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MKS1Q9NXB0 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MKS1Q9NXB0 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
MKS1Q9NXB0 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
MKS1Q9NXB0 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MKS1Q9NXB0 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
MKS1Q9NXB0 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MKS1Q9NXB0 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MKS1Q9NXB0 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.86□□□□□ -0.03
MKS1Q9NXB0 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
MKS1Q9NXB0 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.86□□□□□ -0.03
MKS1Q9NXB0 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
MKS1Q9NXB0 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MKS1Q9NXB0 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MKS1Q9NXB0 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
MKS1Q9NXB0 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MKS1Q9NXB0 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MKS1Q9NXB0 AL359183.1-201ENST00000623796 2132 ntBASIC14.86□□□□□ -0.03
MKS1Q9NXB0 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
MKS1Q9NXB0 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MKS1Q9NXB0 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MKS1Q9NXB0 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
MKS1Q9NXB0 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 KRT18P13-201ENST00000400056 1290 ntBASIC14.85□□□□□ -0.03
MKS1Q9NXB0 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 AC105206.1-202ENST00000314927 2368 ntBASIC14.85□□□□□ -0.03
MKS1Q9NXB0 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MKS1Q9NXB0 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.84□□□□□ -0.03
MKS1Q9NXB0 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MKS1Q9NXB0 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MKS1Q9NXB0 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MKS1Q9NXB0 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.84□□□□□ -0.03
MKS1Q9NXB0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MKS1Q9NXB0 CICP17-201ENST00000418553 2377 ntBASIC14.84□□□□□ -0.03
MKS1Q9NXB0 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MKS1Q9NXB0 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.84□□□□□ -0.03
MKS1Q9NXB0 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
MKS1Q9NXB0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
MKS1Q9NXB0 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MKS1Q9NXB0 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MKS1Q9NXB0 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MKS1Q9NXB0 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
MKS1Q9NXB0 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.84□□□□□ -0.03
MKS1Q9NXB0 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MKS1Q9NXB0 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MKS1Q9NXB0 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MKS1Q9NXB0 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.84□□□□□ -0.03
MKS1Q9NXB0 AL139094.1-201ENST00000405549 1188 ntBASIC14.84□□□□□ -0.03
MKS1Q9NXB0 AC254562.1-201ENST00000417586 456 ntBASIC14.84□□□□□ -0.03
MKS1Q9NXB0 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.84□□□□□ -0.03
MKS1Q9NXB0 CNN2P2-201ENST00000443536 909 ntBASIC14.84□□□□□ -0.03
MKS1Q9NXB0 CNN2P3-201ENST00000450201 906 ntBASIC14.84□□□□□ -0.03
MKS1Q9NXB0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.84□□□□□ -0.03
MKS1Q9NXB0 HLA-J-203ENST00000494367 1087 ntBASIC14.84□□□□□ -0.03
MKS1Q9NXB0 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
MKS1Q9NXB0 AC092865.5-201ENST00000545435 363 ntBASIC14.84□□□□□ -0.03
MKS1Q9NXB0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MKS1Q9NXB0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.84□□□□□ -0.03
MKS1Q9NXB0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MKS1Q9NXB0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms