Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 GUSBP10-201ENST00000417412 665 ntBASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 GAS5-209ENST00000430245 723 ntTSL 3 BASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 DBP-202ENST00000593500 712 ntTSL 2 BASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SLC52A1Q9NWF4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC52A1Q9NWF4 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC52A1Q9NWF4 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC52A1Q9NWF4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC52A1Q9NWF4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SLC52A1Q9NWF4 JTB-202ENST00000356648 1040 ntTSL 2 BASIC21.08■□□□□ 0.97
SLC52A1Q9NWF4 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SLC52A1Q9NWF4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC52A1Q9NWF4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
SLC52A1Q9NWF4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC52A1Q9NWF4 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC21.08■□□□□ 0.97
SLC52A1Q9NWF4 BCAS2P2-201ENST00000425064 674 ntBASIC21.08■□□□□ 0.97
SLC52A1Q9NWF4 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SLC52A1Q9NWF4 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
SLC52A1Q9NWF4 NEU3-207ENST00000534628 746 ntTSL 2 BASIC21.08■□□□□ 0.97
SLC52A1Q9NWF4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC21.08■□□□□ 0.97
SLC52A1Q9NWF4 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC21.08■□□□□ 0.97
SLC52A1Q9NWF4 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC21.08■□□□□ 0.97
SLC52A1Q9NWF4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SLC52A1Q9NWF4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SLC52A1Q9NWF4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
SLC52A1Q9NWF4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC21.08■□□□□ 0.96
SLC52A1Q9NWF4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
SLC52A1Q9NWF4 AL136172.1-201ENST00000598590 1394 ntBASIC21.08■□□□□ 0.96
SLC52A1Q9NWF4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC21.08■□□□□ 0.96
SLC52A1Q9NWF4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SLC52A1Q9NWF4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
SLC52A1Q9NWF4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SLC52A1Q9NWF4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 API5-203ENST00000455725 2257 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 PCDHGB8P-201ENST00000502926 1973 ntBASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 CR383656.3-201ENST00000551315 183 ntBASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC52A1Q9NWF4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC21.06■□□□□ 0.96
SLC52A1Q9NWF4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC52A1Q9NWF4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC52A1Q9NWF4 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC52A1Q9NWF4 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC21.06■□□□□ 0.96
SLC52A1Q9NWF4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
SLC52A1Q9NWF4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SLC52A1Q9NWF4 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC52A1Q9NWF4 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC52A1Q9NWF4 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC52A1Q9NWF4 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC21.06■□□□□ 0.96
SLC52A1Q9NWF4 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC21.06■□□□□ 0.96
SLC52A1Q9NWF4 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SLC52A1Q9NWF4 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC21.06■□□□□ 0.96
SLC52A1Q9NWF4 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC21.06■□□□□ 0.96
SLC52A1Q9NWF4 C2orf69P1-201ENST00000563532 1093 ntBASIC21.06■□□□□ 0.96
SLC52A1Q9NWF4 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC21.06■□□□□ 0.96
SLC52A1Q9NWF4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC52A1Q9NWF4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC52A1Q9NWF4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SLC52A1Q9NWF4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms