Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 LRRC32-203ENST00000407242 4311 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 C16orf82-202ENST00000505035 2459 ntAPPRIS P5 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 FOXJ3-202ENST00000361776 5106 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 DZIP1L-201ENST00000327532 3493 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 MED24-203ENST00000394127 3456 ntTSL 2 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 TLE4-201ENST00000265284 2382 ntTSL 2 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 CACNB3-204ENST00000547230 2395 ntTSL 3 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 DDC-213ENST00000617822 1809 ntTSL 3 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 AC010980.1-201ENST00000587192 1142 ntBASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 SPTSSB-204ENST00000617024 1292 ntBASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 FOSL2-202ENST00000379619 5829 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 AL157996.1-201ENST00000624684 2299 ntBASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 RSBN1-206ENST00000616024 2703 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 MECP2-201ENST00000303391 10505 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 RBM8A-204ENST00000583313 4961 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 CXorf38-203ENST00000378426 4895 ntTSL 2 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 WDR70-201ENST00000265107 2983 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 ISM2-202ENST00000342219 2971 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 SLC38A1-202ENST00000439706 3436 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 VCL-202ENST00000372755 6489 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 CEP350-202ENST00000367607 13491 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 CMIP-203ENST00000539778 3937 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 GREB1L-209ENST00000580732 8749 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 TUFT1-202ENST00000368848 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 COLQ-203ENST00000383788 3005 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 FAM222B-209ENST00000581407 4161 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 PIP5K1A-203ENST00000368890 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 ERBB2-204ENST00000541774 4341 ntTSL 5 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 MAN2B1-201ENST00000221363 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 LINC02362-203ENST00000617323 2044 ntTSL 2 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 TNPO2-210ENST00000588216 3056 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 SLC22A12-204ENST00000377574 3206 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 DLGAP2-AS1-201ENST00000518009 1810 ntTSL 2 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 PAX9-202ENST00000402703 3104 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 ZNF266-206ENST00000592292 3100 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 ACVR1-203ENST00000410057 2084 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 AC005622.1-201ENST00000636801 1703 ntBASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 FCGR3A-206ENST00000443193 2306 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 NEK6-212ENST00000539416 2582 ntTSL 2 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 NUAK2-201ENST00000367157 3441 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 DNAJB5-210ENST00000545841 3068 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 DAND5-201ENST00000317060 1877 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 YBX1P4-201ENST00000392794 808 ntBASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 AL390719.1-204ENST00000412397 1219 ntBASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms