Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 AL360270.3-201ENST00000609118 1348 ntBASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 IGLL3P-201ENST00000412472 434 ntBASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 AC008735.5-201ENST00000623544 497 ntBASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 AC215219.1-201ENST00000400706 1817 ntBASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 AC125807.2-201ENST00000513358 3514 ntBASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 AP3S2-216ENST00000617003 1561 ntBASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 MKRN5P-201ENST00000445263 1467 ntBASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 GOLGA2P5-201ENST00000266746 2395 ntBASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 TSPY19P-201ENST00000418461 509 ntBASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 TSPY18P-201ENST00000441642 509 ntBASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 MYADML-201ENST00000474610 2147 ntBASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 FOSL1P1-201ENST00000511041 816 ntBASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 AC026979.3-201ENST00000607315 403 ntBASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 AL161645.1-201ENST00000622716 1255 ntBASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 DLX4-206ENST00000611342 1662 ntBASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms