Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 AC099063.4-201ENST00000641099 1602 ntBASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 KRT8P14-201ENST00000414254 1442 ntBASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 AC018463.1-201ENST00000456674 917 ntBASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 SNORD3B-2-202ENST00000571722 791 ntBASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 RN7SL596P-201ENST00000582123 288 ntBASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 DGAT2L7P-201ENST00000602462 744 ntBASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 AL132994.2-201ENST00000603120 687 ntBASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 AC007881.3-201ENST00000608897 607 ntBASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.57■□□□□ 0.24
UBE2OQ9C0C9 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 EIF3FP3-201ENST00000434851 1086 ntBASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 DNM1P51-201ENST00000558149 522 ntBASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 C2orf69P1-201ENST00000563532 1093 ntBASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 AC018892.3-201ENST00000623986 2499 ntBASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 AC069224.1-201ENST00000566372 1715 ntBASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBE2OQ9C0C9 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms