Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 AC018665.1-201ENST00000622927 1362 ntBASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 AC023090.2-201ENST00000625182 2110 ntBASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 AL354702.1-201ENST00000442006 1960 ntBASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 AC022447.6-201ENST00000515522 438 ntBASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 AC027369.6-201ENST00000525520 931 ntBASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 AC092865.5-201ENST00000545435 363 ntBASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 SNHG9-202ENST00000564014 471 ntBASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 AL844908.2-201ENST00000609461 460 ntBASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 AL158212.4-201ENST00000624062 1286 ntBASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 AC134684.3-201ENST00000641758 218 ntBASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 TUBB3P1-201ENST00000405796 1332 ntBASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 AC055811.4-201ENST00000624039 1754 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms