Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 AC023157.3-201ENST00000619086 2088 ntBASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 AC073347.1-201ENST00000421633 2643 ntBASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 MIR326-201ENST00000362220 95 ntBASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 RN7SKP230-201ENST00000365642 335 ntBASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDK5RAP1Q96SZ6 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDK5RAP1Q96SZ6 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CDK5RAP1Q96SZ6 ACE3P-201ENST00000423435 1973 ntBASIC15.58■□□□□ 0.09
CDK5RAP1Q96SZ6 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDK5RAP1Q96SZ6 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.58■□□□□ 0.09
CDK5RAP1Q96SZ6 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDK5RAP1Q96SZ6 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
CDK5RAP1Q96SZ6 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.58■□□□□ 0.09
CDK5RAP1Q96SZ6 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
CDK5RAP1Q96SZ6 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDK5RAP1Q96SZ6 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 RPSAP36-202ENST00000494591 1261 ntBASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 FAM8A2P-201ENST00000528813 1142 ntBASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 MIR6869-201ENST00000619434 62 ntBASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDK5RAP1Q96SZ6 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms